Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RHOXF1 95 30 160 72 0 0 0.368 0.116 0.620 0.279 0.000 0.000 chrX 120104051 120120913
view RHOXF2B 102 44 113 47 34 5 0.395 0.171 0.438 0.182 0.132 0.019 chrX 120067264 120082690
view RHOXF2 49 10 151 59 6 2 0.190 0.039 0.585 0.229 0.023 0.008 chrX 120153613 120170630
view RHO 201 79 57 26 0 0 0.779 0.306 0.221 0.101 0.000 0.000 chr3 129523639 129540344
view RHPN1 212 72 39 27 0 0 0.822 0.279 0.151 0.105 0.000 0.000 chr8 143363876 143389221
view RHPN2 162 45 73 46 0 0 0.628 0.174 0.283 0.178 0.000 0.000 chr19 32973592 33069888
view RIBC1 74 23 184 82 0 0 0.287 0.089 0.713 0.318 0.000 0.000 chrX 53417873 53436115
view RIBC2 211 72 45 31 1 1 0.818 0.279 0.174 0.120 0.004 0.004 chr22 45408693 45437509
view RIC1 163 44 68 42 0 0 0.632 0.171 0.264 0.163 0.000 0.000 chr9 5624107 5781557
view RIC3 184 57 60 40 0 0 0.713 0.221 0.233 0.155 0.000 0.000 chr11 8101056 8174025
view RIC8A 215 74 37 27 1 1 0.833 0.287 0.143 0.105 0.004 0.004 chr11 202708 220113
view RIC8B 158 39 75 48 0 0 0.612 0.151 0.291 0.186 0.000 0.000 chr12 106769682 106894316
view RICTOR 168 59 74 39 0 0 0.651 0.229 0.287 0.151 0.000 0.000 chr5 38932920 39079399
view RIDA 228 84 27 21 0 0 0.884 0.326 0.105 0.081 0.000 0.000 chr8 98097344 98122171
view RIF1 189 68 64 35 0 0 0.733 0.264 0.248 0.136 0.000 0.000 chr2 151404902 151487172
view RIGI 171 47 74 52 0 0 0.663 0.182 0.287 0.202 0.000 0.000 chr9 32450302 32531196
view RIIAD1 208 73 47 30 1 0 0.806 0.283 0.182 0.116 0.004 0.000 chr1 151716522 151734805
view RILPL1 104 6 128 83 0 0 0.403 0.023 0.496 0.322 0.000 0.000 chr12 123465054 123538719
view RILPL2 192 62 55 35 0 0 0.744 0.240 0.213 0.136 0.000 0.000 chr12 123410039 123441684
view RILP 187 58 64 40 0 0 0.725 0.225 0.248 0.155 0.000 0.000 chr17 1641150 1654866
view RIMBP2 89 12 82 48 0 0 0.345 0.047 0.318 0.186 0.000 0.000 chr12 130391133 130721299
view RIMBP3B 59 9 104 40 0 0 0.229 0.035 0.403 0.155 0.000 0.000 chr22 21378751 21394478
view RIMBP3C 100 35 77 43 56 7 0.388 0.136 0.298 0.167 0.217 0.027 chr22 21540666 21556461
view RIMBP3 15 0 97 42 5 1 0.058 0.000 0.376 0.163 0.019 0.004 chr22 18600815 18616919
view RIMKLA 177 53 62 41 0 0 0.686 0.205 0.240 0.159 0.000 0.000 chr1 42375792 42429232
view RIMKLB 146 37 74 45 0 0 0.566 0.143 0.287 0.174 0.000 0.000 chr12 8692991 8782191
view RIMOC1 158 38 95 62 0 0 0.612 0.147 0.368 0.240 0.000 0.000 chr5 41899344 41926636
view RIMS1 69 4 111 70 0 0 0.267 0.016 0.430 0.271 0.000 0.000 chr6 71881550 72408145
view RIMS2 85 15 112 61 0 0 0.329 0.058 0.434 0.236 0.000 0.000 chr8 103495610 104259430
view RIMS3 187 56 57 38 0 0 0.725 0.217 0.221 0.147 0.000 0.000 chr1 40615680 40670682
view RIMS4 190 56 52 36 0 0 0.736 0.217 0.202 0.140 0.000 0.000 chr20 44746808 44815546
view RIN1 209 71 46 31 0 0 0.810 0.275 0.178 0.120 0.000 0.000 chr11 66325241 66341434
view RIN2 137 29 55 37 0 0 0.531 0.112 0.213 0.143 0.000 0.000 chr20 19753258 20007456
view RIN3 166 43 45 31 0 0 0.643 0.167 0.174 0.120 0.000 0.000 chr14 92508781 92693994
view RING1 212 73 44 32 1 0 0.822 0.283 0.171 0.124 0.004 0.000 chr6 33203500 33217716
view RINL 202 67 49 31 0 0 0.783 0.260 0.190 0.120 0.000 0.000 chr19 38862830 38883275
view RINT1 183 50 57 39 0 0 0.709 0.194 0.221 0.151 0.000 0.000 chr7 105527201 105572677
view RIOK1 186 60 63 40 0 0 0.721 0.233 0.244 0.155 0.000 0.000 chr6 7384808 7423037
view RIOK2 204 71 49 30 0 0 0.791 0.275 0.190 0.116 0.000 0.000 chr5 97155867 97188247
view RIOK3 200 69 48 31 0 0 0.775 0.267 0.186 0.120 0.000 0.000 chr18 23448287 23488140
view RIOX1 210 71 47 33 0 0 0.814 0.275 0.182 0.128 0.000 0.000 chr14 73485933 73498394
view RIOX2 184 53 59 39 0 0 0.713 0.205 0.229 0.151 0.000 0.000 chr3 97936818 97977431
view RIPK1 169 47 71 45 0 0 0.655 0.182 0.275 0.174 0.000 0.000 chr6 3063494 3120187
view RIPK2 189 65 63 36 0 0 0.733 0.252 0.244 0.140 0.000 0.000 chr8 89752816 89796064
view RIPK3 213 78 43 25 0 0 0.826 0.302 0.167 0.097 0.000 0.000 chr14 24331025 24344991
view RIPK4 223 78 26 19 0 0 0.864 0.302 0.101 0.074 0.000 0.000 chr21 41734373 41772052
view RIPOR1 111 12 135 86 0 0 0.430 0.047 0.523 0.333 0.000 0.000 chr16 67523829 67551786
view RIPOR2 163 54 51 32 0 0 0.632 0.209 0.198 0.124 0.000 0.000 chr6 24799284 24940960
view RIPOR3 139 37 87 48 0 0 0.539 0.143 0.337 0.186 0.000 0.000 chr20 50581108 50696542
view RIPPLY1 85 26 166 76 1 0 0.329 0.101 0.643 0.295 0.004 0.000 chrX 106895063 106908341