Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RPL28 156 33 93 63 0 0 0.605 0.128 0.360 0.244 0.000 0.000 chr19 55380932 55397085
view RPL29 160 43 91 58 1 0 0.620 0.167 0.353 0.225 0.004 0.000 chr3 51988522 52000895
view RPL30 223 83 31 20 2 1 0.864 0.322 0.120 0.078 0.008 0.004 chr8 98036721 98050545
view RPL31 219 84 36 19 1 1 0.849 0.326 0.140 0.074 0.004 0.004 chr2 100997289 101012267
view RPL32 202 68 51 33 1 0 0.783 0.264 0.198 0.128 0.004 0.000 chr3 12829485 12846565
view RPL34 195 62 62 43 0 0 0.756 0.240 0.240 0.167 0.000 0.000 chr4 108615576 108630370
view RPL35A 186 58 64 41 0 0 0.721 0.225 0.248 0.159 0.000 0.000 chr3 197945190 197961610
view RPL35 204 68 52 35 0 0 0.791 0.264 0.202 0.136 0.000 0.000 chr9 124852883 124866957
view RPL36AL 176 49 80 54 0 0 0.682 0.190 0.310 0.209 0.000 0.000 chr14 49613530 49625626
view RPL36A 96 27 159 75 0 0 0.372 0.105 0.616 0.291 0.000 0.000 chrX 101386011 101401155
view RPL36 196 60 54 38 0 0 0.760 0.233 0.209 0.147 0.000 0.000 chr19 5685295 5696875
view RPL37A 219 79 39 26 0 0 0.849 0.306 0.151 0.101 0.000 0.000 chr2 216493844 216509086
view RPL37 219 80 34 21 1 1 0.849 0.310 0.132 0.081 0.004 0.004 chr5 40820262 40840222
view RPL38 222 77 36 28 0 0 0.860 0.298 0.140 0.109 0.000 0.000 chr17 74198678 74215655
view RPL39L 199 67 54 34 0 0 0.771 0.260 0.209 0.132 0.000 0.000 chr3 187115948 187144496
view RPL39 99 30 154 70 0 0 0.384 0.116 0.597 0.271 0.000 0.000 chrX 119781504 119796630
view RPL3L 224 77 27 22 1 0 0.868 0.298 0.105 0.085 0.004 0.000 chr16 1938974 1959689
view RPL3 190 48 62 52 0 0 0.736 0.186 0.240 0.202 0.000 0.000 chr22 39307882 39324623
view RPL41 175 50 78 50 0 0 0.678 0.194 0.302 0.194 0.000 0.000 chr12 56111633 56122967
view RPL4 213 74 39 27 2 0 0.826 0.287 0.151 0.105 0.008 0.000 chr15 66493015 66509855
view RPL5 165 35 71 52 0 0 0.640 0.136 0.275 0.202 0.000 0.000 chr1 92827040 92846924
view RPL6 202 73 52 29 0 0 0.783 0.283 0.202 0.112 0.000 0.000 chr12 112400189 112414605
view RPL7A 217 76 41 29 0 0 0.841 0.295 0.159 0.112 0.000 0.000 chr9 133343218 133356426
view RPL7L1 198 60 54 40 0 0 0.767 0.233 0.209 0.155 0.000 0.000 chr6 42874616 42894900
view RPL7 223 85 33 19 0 0 0.864 0.329 0.128 0.074 0.000 0.000 chr8 73285242 73298633
view RPL8 206 68 47 33 1 1 0.798 0.264 0.182 0.128 0.004 0.004 chr8 144784769 144797390
view RPL9 223 84 34 20 0 0 0.864 0.326 0.132 0.078 0.000 0.000 chr4 39449124 39463922
view RPLP0 185 60 71 44 0 0 0.717 0.233 0.275 0.171 0.000 0.000 chr12 120191699 120206111
view RPLP1 210 82 47 23 0 0 0.814 0.318 0.182 0.089 0.000 0.000 chr15 69447818 69461205
view RPLP2 213 69 34 25 0 0 0.826 0.267 0.132 0.097 0.000 0.000 chr11 804967 817876
view RPN1 193 62 55 35 0 0 0.748 0.240 0.213 0.136 0.000 0.000 chr3 128614969 128655818
view RPN2 172 58 76 40 0 0 0.667 0.225 0.295 0.155 0.000 0.000 chr20 37174330 37246619
view RPP14 184 55 65 42 0 0 0.713 0.213 0.252 0.163 0.000 0.000 chr3 58301245 58325193
view RPP21 233 87 24 17 1 1 0.903 0.337 0.093 0.066 0.004 0.004 chr6 30340156 30351857
view RPP25L 211 76 44 26 0 0 0.818 0.295 0.171 0.101 0.000 0.000 chr9 34605495 34617097
view RPP25 210 77 45 25 0 0 0.814 0.298 0.174 0.097 0.000 0.000 chr15 74949418 74961772
view RPP30 219 81 37 22 0 0 0.849 0.314 0.143 0.085 0.000 0.000 chr10 90866974 90907191
view RPP38 190 61 59 35 0 0 0.736 0.236 0.229 0.136 0.000 0.000 chr10 15092355 15109257
view RPP40 179 43 73 57 0 0 0.694 0.167 0.283 0.221 0.000 0.000 chr6 4989717 5009037
view RPRD1A 158 45 81 48 0 0 0.612 0.174 0.314 0.186 0.000 0.000 chr18 35984824 36072559
view RPRD1B 191 76 57 22 0 0 0.740 0.295 0.221 0.085 0.000 0.000 chr20 38028746 38097364
view RPRD2 158 48 89 50 0 0 0.612 0.186 0.345 0.194 0.000 0.000 chr1 150359147 150481566
view RPRML 225 84 32 20 0 0 0.872 0.326 0.124 0.078 0.000 0.000 chr17 46973156 46984253
view RPRM 204 69 53 35 0 0 0.791 0.267 0.205 0.136 0.000 0.000 chr2 153472338 153483762
view RPS10 194 61 58 40 2 0 0.752 0.236 0.225 0.155 0.008 0.000 chr6 34412454 34431069
view RPS11 176 53 79 50 0 0 0.682 0.205 0.306 0.194 0.000 0.000 chr19 49491434 49504708
view RPS12 195 68 62 36 0 0 0.756 0.264 0.240 0.140 0.000 0.000 chr6 132809569 132822564
view RPS13 203 71 52 31 1 1 0.787 0.275 0.202 0.120 0.004 0.004 chr11 17069388 17082667
view RPS14 206 76 50 28 0 0 0.798 0.295 0.194 0.109 0.000 0.000 chr5 150437635 150454739
view RPS15A 174 45 81 57 0 0 0.674 0.174 0.314 0.221 0.000 0.000 chr16 18776295 18795334