Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view RPS15 189 47 66 56 0 0 0.733 0.182 0.256 0.217 0.000 0.000 chr19 1433396 1445495
view RPS16 204 73 51 29 0 0 0.791 0.283 0.198 0.112 0.000 0.000 chr19 39428137 39440949
view RPS17 227 85 30 19 1 1 0.880 0.329 0.116 0.074 0.004 0.004 chr15 82531750 82545457
view RPS18 187 63 70 41 0 0 0.725 0.244 0.271 0.159 0.000 0.000 chr6 33267075 33281511
view RPS19BP1 163 40 91 62 1 0 0.632 0.155 0.353 0.240 0.004 0.000 chr22 39524093 39537748
view RPS19 194 74 58 26 0 0 0.752 0.287 0.225 0.101 0.000 0.000 chr19 41855255 41877925
view RPS20 165 43 88 58 1 0 0.640 0.167 0.341 0.225 0.004 0.000 chr8 56068054 56079506
view RPS21 206 64 41 32 0 0 0.798 0.248 0.159 0.124 0.000 0.000 chr20 62382103 62393520
view RPS23 208 74 48 29 1 1 0.806 0.287 0.186 0.112 0.004 0.004 chr5 82268320 82283354
view RPS24 214 76 41 26 0 0 0.829 0.295 0.159 0.101 0.000 0.000 chr10 78028863 78045697
view RPS25 177 48 74 51 2 1 0.686 0.186 0.287 0.198 0.008 0.004 chr11 119010717 119023343
view RPS26 188 68 67 34 0 0 0.729 0.264 0.260 0.132 0.000 0.000 chr12 56036918 56049697
view RPS27A 219 83 37 20 1 1 0.849 0.322 0.143 0.078 0.004 0.004 chr2 55227688 55240853
view RPS27L 214 75 43 30 0 0 0.829 0.291 0.167 0.116 0.000 0.000 chr15 63143249 63162477
view RPS27 201 71 49 29 2 1 0.779 0.275 0.190 0.112 0.008 0.004 chr1 153985762 153997155
view RPS28 201 62 52 39 1 0 0.779 0.240 0.202 0.151 0.004 0.000 chr19 8316496 8328340
view RPS29 167 39 89 64 0 0 0.647 0.151 0.345 0.248 0.000 0.000 chr14 49578577 49591380
view RPS2 218 73 36 28 0 0 0.845 0.283 0.140 0.109 0.000 0.000 chr16 1957058 1969826
view RPS3A 194 63 62 40 0 0 0.752 0.244 0.240 0.155 0.000 0.000 chr4 151094628 151109642
view RPS3 205 69 49 33 0 0 0.795 0.267 0.190 0.128 0.000 0.000 chr11 75394518 75411907
view RPS4X 92 31 164 72 0 0 0.357 0.120 0.636 0.279 0.000 0.000 chrX 72267042 72282248
view RPS4Y1 0 0 129 55 0 0 0.000 0.000 0.500 0.213 0.000 0.000 chrY 2836602 2872268
view RPS4Y2 0 0 130 56 0 0 0.000 0.000 0.504 0.217 0.000 0.000 chrY 20751108 20786032
view RPS5 215 72 37 27 0 0 0.833 0.279 0.143 0.105 0.000 0.000 chr19 58382269 58399804
view RPS6KA1 164 40 78 54 0 0 0.636 0.155 0.302 0.209 0.000 0.000 chr1 26524761 26580025
view RPS6KA2 121 28 69 37 0 0 0.469 0.109 0.267 0.143 0.000 0.000 chr6 166404364 166632251
view RPS6KA3 41 3 198 94 0 0 0.159 0.012 0.767 0.364 0.000 0.000 chrX 20144911 20271909
view RPS6KA4 200 60 52 39 0 0 0.775 0.233 0.202 0.151 0.000 0.000 chr11 64354162 64377215
view RPS6KA5 152 43 79 46 0 0 0.589 0.167 0.306 0.178 0.000 0.000 chr14 90842861 91065641
view RPS6KA6 74 25 168 74 0 0 0.287 0.097 0.651 0.287 0.000 0.000 chrX 84053350 84193199
view RPS6KB1 151 49 92 49 0 0 0.585 0.190 0.357 0.190 0.000 0.000 chr17 59888121 59955574
view RPS6KB2 188 62 65 40 1 0 0.729 0.240 0.252 0.155 0.004 0.000 chr11 67423494 67440401
view RPS6KC1 164 60 82 39 0 0 0.636 0.233 0.318 0.151 0.000 0.000 chr1 213046241 213279774
view RPS6KL1 184 64 73 40 0 0 0.713 0.248 0.283 0.155 0.000 0.000 chr14 74898951 74928260
view RPS6 210 71 45 32 1 0 0.814 0.275 0.174 0.124 0.004 0.000 chr9 19370715 19385236
view RPS7 214 68 41 34 0 0 0.829 0.264 0.159 0.132 0.000 0.000 chr2 3570260 3585920
view RPS8 200 69 55 35 0 0 0.775 0.267 0.213 0.136 0.000 0.000 chr1 44770540 44783779
view RPS9 228 82 27 20 0 0 0.884 0.318 0.105 0.078 0.000 0.000 chr19 54195858 54212647
view RPSA2 182 61 65 37 0 0 0.705 0.236 0.252 0.143 0.000 0.000 chr19 23758004 23833868
view RPSA 191 65 64 38 1 1 0.740 0.252 0.248 0.147 0.004 0.004 chr3 39401720 39417542
view RPTN 210 73 46 31 0 0 0.814 0.283 0.178 0.120 0.000 0.000 chr1 152148595 152164228
view RPTOR 97 13 75 39 0 0 0.376 0.050 0.291 0.151 0.000 0.000 chr17 80539838 80971368
view RPUSD1 204 64 49 36 0 0 0.791 0.248 0.190 0.140 0.000 0.000 chr16 779974 793381
view RPUSD2 195 67 62 38 0 0 0.756 0.260 0.240 0.147 0.000 0.000 chr15 40564299 40579949
view RPUSD3 225 83 32 21 0 0 0.872 0.322 0.124 0.081 0.000 0.000 chr3 9832849 9849008
view RPUSD4 207 70 47 32 0 0 0.802 0.271 0.182 0.124 0.000 0.000 chr11 126197096 126216650
view RRAD 192 61 63 41 0 0 0.744 0.236 0.244 0.159 0.000 0.000 chr16 66916685 66930535
view RRAGA 222 81 35 24 0 0 0.860 0.314 0.136 0.093 0.000 0.000 chr9 19044427 19056025
view RRAGB 72 18 176 82 0 0 0.279 0.070 0.682 0.318 0.000 0.000 chrX 55712749 55763774
view RRAGC 208 75 46 27 0 0 0.806 0.291 0.178 0.105 0.000 0.000 chr1 38833198 38864772