Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
Chr Start End
view TMEM254 194 68 58 33 0 0 0.752 0.264 0.225 0.128 0.000 0.000 chr10 80073665 80097551
view TMEM255A 92 29 151 63 0 0 0.357 0.112 0.585 0.244 0.000 0.000 chrX 120253650 120316461
view TMEM255B 129 30 92 45 0 0 0.500 0.116 0.357 0.174 0.000 0.000 chr13 113754226 113821995
view TMEM256 198 56 54 44 2 1 0.767 0.217 0.209 0.171 0.008 0.004 chr17 7397975 7409097
view TMEM258 164 46 91 56 1 1 0.636 0.178 0.353 0.217 0.004 0.004 chr11 61783949 61797599
view TMEM259 214 66 37 32 0 0 0.829 0.256 0.143 0.124 0.000 0.000 chr19 1004653 1026123
view TMEM25 198 66 55 35 1 0 0.767 0.256 0.213 0.136 0.004 0.000 chr11 118526192 118540829
view TMEM260 181 63 59 32 0 0 0.702 0.244 0.229 0.124 0.000 0.000 chr14 56574798 56654515
view TMEM262 190 55 66 48 0 0 0.736 0.213 0.256 0.186 0.000 0.000 chr11 65083376 65094110
view TMEM263 194 76 58 25 0 0 0.752 0.295 0.225 0.097 0.000 0.000 chr12 106950907 106979035
view TMEM265 141 28 115 75 0 0 0.547 0.109 0.446 0.291 0.000 0.000 chr16 30735642 30750196
view TMEM266 136 32 72 43 0 0 0.527 0.124 0.279 0.167 0.000 0.000 chr15 76054985 76209963
view TMEM267 166 49 84 53 0 0 0.643 0.190 0.326 0.205 0.000 0.000 chr5 43439252 43488865
view TMEM268 202 72 48 28 0 0 0.783 0.279 0.186 0.109 0.000 0.000 chr9 114606291 114651422
view TMEM269 204 73 49 28 0 0 0.791 0.283 0.190 0.109 0.000 0.000 chr1 42779991 42805827
view TMEM26 178 62 70 36 0 0 0.690 0.240 0.271 0.140 0.000 0.000 chr10 61401642 61458381
view TMEM270 182 50 65 45 0 0 0.705 0.194 0.252 0.174 0.000 0.000 chr7 73856159 73870890
view TMEM271 175 65 72 31 0 0 0.678 0.252 0.279 0.120 0.000 0.000 chr4 568880 581295
view TMEM272 215 69 33 27 0 0 0.833 0.267 0.128 0.105 0.000 0.000 chr13 51808347 51850177
view TMEM273 180 51 64 42 0 0 0.698 0.198 0.248 0.163 0.000 0.000 chr10 49149736 49193391
view TMEM275 216 77 41 28 1 0 0.837 0.298 0.159 0.109 0.004 0.000 chr1 46527166 46540515
view TMEM276 203 67 49 32 0 0 0.787 0.260 0.190 0.124 0.000 0.000 chr8 144458825 144470492
view TMEM30A 140 39 97 51 0 0 0.543 0.151 0.376 0.198 0.000 0.000 chr6 75247924 75289792
view TMEM30B 223 87 32 16 0 0 0.864 0.337 0.124 0.062 0.000 0.000 chr14 61272370 61286338
view TMEM31 94 30 161 72 0 0 0.364 0.116 0.624 0.279 0.000 0.000 chrX 103705909 103719032
view TMEM33 98 10 149 88 0 0 0.380 0.039 0.578 0.341 0.000 0.000 chr4 41930429 41965803
view TMEM35A 95 25 157 74 0 0 0.368 0.097 0.609 0.287 0.000 0.000 chrX 101073879 101101367
view TMEM35B 205 76 52 28 0 0 0.795 0.295 0.202 0.109 0.000 0.000 chr1 34976380 34990347
view TMEM37 215 73 38 28 1 0 0.833 0.283 0.147 0.109 0.004 0.000 chr2 119426854 119443504
view TMEM38A 165 48 78 47 0 0 0.640 0.186 0.302 0.182 0.000 0.000 chr19 16656139 16695023
view TMEM38B 177 65 66 32 0 0 0.686 0.252 0.256 0.124 0.000 0.000 chr9 105689541 105781629
view TMEM39A 199 66 51 31 0 0 0.771 0.256 0.198 0.120 0.000 0.000 chr3 119423949 119468615
view TMEM39B 167 48 76 42 0 0 0.647 0.186 0.295 0.163 0.000 0.000 chr1 32067939 32107863
view TMEM40 171 49 75 48 0 0 0.663 0.190 0.291 0.186 0.000 0.000 chr3 12728528 12764259
view TMEM41A 197 67 58 35 1 1 0.764 0.260 0.225 0.136 0.004 0.004 chr3 185484601 185504035
view TMEM41B 184 54 68 46 0 0 0.713 0.209 0.264 0.178 0.000 0.000 chr11 9275654 9319593
view TMEM42 192 57 63 45 0 0 0.744 0.221 0.244 0.174 0.000 0.000 chr3 44856912 44870664
view TMEM43 202 68 43 27 0 0 0.783 0.264 0.167 0.105 0.000 0.000 chr3 14120052 14148680
view TMEM44 201 60 44 34 0 0 0.779 0.233 0.171 0.132 0.000 0.000 chr3 194582678 194638419
view TMEM45A 160 56 76 40 0 0 0.620 0.217 0.295 0.155 0.000 0.000 chr3 100487619 100582444
view TMEM45B 201 71 48 28 0 0 0.779 0.275 0.186 0.109 0.000 0.000 chr11 129810848 129865003
view TMEM47 78 23 174 78 0 0 0.302 0.089 0.674 0.302 0.000 0.000 chrX 34622075 34662285
view TMEM50A 189 59 52 34 0 0 0.733 0.229 0.202 0.132 0.000 0.000 chr1 25333334 25367361
view TMEM50B 189 56 56 39 0 0 0.733 0.217 0.217 0.151 0.000 0.000 chr21 33444141 33484974
view TMEM51 148 32 82 55 0 0 0.574 0.124 0.318 0.213 0.000 0.000 chr1 15148747 15225478
view TMEM52B 214 74 40 27 1 1 0.829 0.287 0.155 0.105 0.004 0.004 chr12 10174032 10196804
view TMEM52 181 54 64 40 0 0 0.702 0.209 0.248 0.155 0.000 0.000 chr1 1912591 1924279
view TMEM53 167 39 77 55 0 0 0.647 0.151 0.298 0.213 0.000 0.000 chr1 44648247 44679481
view TMEM54 180 57 72 42 0 0 0.698 0.221 0.279 0.163 0.000 0.000 chr1 32889595 32906389
view TMEM59L 203 72 54 32 0 0 0.787 0.279 0.209 0.124 0.000 0.000 chr19 18607870 18626039