Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TNFRSF14 197 59 55 40 0 0 0.764 0.229 0.213 0.155 0.000 0.000 chr1 2551371 2568829
view TNFRSF17 208 66 48 37 0 0 0.806 0.256 0.186 0.143 0.000 0.000 chr16 11960210 11973068
view TNFRSF18 192 58 60 44 0 0 0.744 0.225 0.233 0.171 0.000 0.000 chr1 1198508 1211592
view TNFRSF19 193 73 39 23 0 0 0.748 0.283 0.151 0.089 0.000 0.000 chr13 23565412 23681093
view TNFRSF1A 216 74 38 29 0 0 0.837 0.287 0.147 0.112 0.000 0.000 chr12 6323771 6347076
view TNFRSF1B 180 50 60 43 0 0 0.698 0.194 0.233 0.167 0.000 0.000 chr1 12161991 12214220
view TNFRSF21 173 51 66 42 0 0 0.671 0.198 0.256 0.163 0.000 0.000 chr6 47226532 47314905
view TNFRSF25 160 31 82 59 0 0 0.620 0.120 0.318 0.229 0.000 0.000 chr1 6455786 6471173
view TNFRSF4 202 67 51 33 0 0 0.783 0.260 0.198 0.128 0.000 0.000 chr1 1206340 1219153
view TNFRSF6B 16 1 88 18 0 0 0.062 0.004 0.341 0.070 0.000 0.000 chr20 63691652 63703684
view TNFRSF8 180 57 47 30 0 0 0.698 0.221 0.182 0.116 0.000 0.000 chr1 12058303 12149207
view TNFRSF9 191 70 56 28 0 0 0.740 0.271 0.217 0.109 0.000 0.000 chr1 7910871 7945839
view TNFSF10 218 78 34 22 0 0 0.845 0.302 0.132 0.085 0.000 0.000 chr3 172500508 172528430
view TNFSF11 204 81 49 21 0 0 0.791 0.314 0.190 0.081 0.000 0.000 chr13 42569152 42613013
view TNFSF12 217 74 39 29 0 0 0.841 0.287 0.151 0.112 0.000 0.000 chr17 7544058 7562881
view TNFSF13B 191 59 49 35 0 0 0.740 0.229 0.190 0.136 0.000 0.000 chr13 108264718 108313478
view TNFSF13 219 76 35 25 0 0 0.849 0.295 0.136 0.097 0.000 0.000 chr17 7553750 7566601
view TNFSF14 232 86 23 16 0 0 0.899 0.333 0.089 0.062 0.000 0.000 chr19 6656253 6675160
view TNFSF15 204 69 47 29 0 0 0.791 0.267 0.182 0.112 0.000 0.000 chr9 114779652 114811039
view TNFSF18 172 46 85 59 0 0 0.667 0.178 0.329 0.229 0.000 0.000 chr1 173034202 173055941
view TNFSF4 143 30 103 64 0 0 0.554 0.116 0.399 0.248 0.000 0.000 chr1 173178731 173212331
view TNFSF8 201 67 51 33 1 0 0.779 0.260 0.198 0.128 0.004 0.000 chr9 114896145 114935591
view TNFSF9 192 52 60 48 2 1 0.744 0.202 0.233 0.186 0.008 0.004 chr19 6526026 6540924
view TNF 201 72 46 31 9 0 0.779 0.279 0.178 0.120 0.035 0.000 chr6 31570565 31583336
view TNIK 51 3 107 59 0 0 0.198 0.012 0.415 0.229 0.000 0.000 chr3 171053414 171465405
view TNIP1 200 72 42 24 0 0 0.775 0.279 0.163 0.093 0.000 0.000 chr5 151024945 151086034
view TNIP2 211 71 39 28 1 0 0.818 0.275 0.151 0.109 0.004 0.000 chr4 2736648 2761336
view TNIP3 146 29 98 64 0 0 0.566 0.112 0.380 0.248 0.000 0.000 chr4 121126408 121169321
view TNK1 225 80 31 23 1 1 0.872 0.310 0.120 0.089 0.004 0.004 chr17 7376089 7394742
view TNK2 185 54 55 38 0 0 0.717 0.209 0.213 0.147 0.000 0.000 chr3 195858364 195913551
view TNKS1BP1 172 38 73 57 0 0 0.667 0.147 0.283 0.221 0.000 0.000 chr11 57294642 57329952
view TNKS2 172 53 76 45 0 0 0.667 0.205 0.295 0.174 0.000 0.000 chr10 91793426 91870475
view TNKS 135 36 89 44 0 0 0.523 0.140 0.345 0.171 0.000 0.000 chr8 9550912 9787346
view TNMD 100 31 155 71 0 0 0.388 0.120 0.601 0.275 0.000 0.000 chrX 100579936 100604885
view TNNC1 180 50 71 49 0 0 0.698 0.194 0.275 0.190 0.000 0.000 chr3 52446100 52459041
view TNNC2 205 73 46 27 3 1 0.795 0.283 0.178 0.105 0.012 0.004 chr20 45818214 45832312
view TNNI1 230 84 26 19 0 0 0.891 0.326 0.101 0.074 0.000 0.000 chr1 201398784 201426730
view TNNI2 233 85 18 14 1 0 0.903 0.329 0.070 0.054 0.004 0.000 chr11 1833981 1846678
view TNNI3K 96 15 92 59 0 0 0.372 0.058 0.357 0.229 0.000 0.000 chr1 74230387 74549428
view TNNI3 193 57 57 41 0 0 0.748 0.221 0.221 0.159 0.000 0.000 chr19 55146767 55162732
view TNNT1 159 39 72 42 0 0 0.616 0.151 0.279 0.163 0.000 0.000 chr19 55127698 55154206
view TNNT2 220 80 31 19 0 0 0.853 0.310 0.120 0.074 0.000 0.000 chr1 201354014 201382680
view TNNT3 62 4 85 17 0 0 0.240 0.016 0.329 0.066 0.000 0.000 chr11 1914703 1943702
view TNN 186 61 52 32 0 0 0.721 0.236 0.202 0.124 0.000 0.000 chr1 175062833 175153075
view TNP1 198 68 57 35 1 0 0.767 0.264 0.221 0.136 0.004 0.000 chr2 216854458 216865064
view TNP2 211 72 45 32 1 0 0.818 0.279 0.174 0.124 0.004 0.000 chr16 11262857 11274325
view TNPO1 160 48 86 49 0 0 0.620 0.186 0.333 0.190 0.000 0.000 chr5 72811661 72919388
view TNPO2 159 42 77 45 0 0 0.616 0.163 0.298 0.174 0.000 0.000 chr19 12694201 12728932
view TNPO3 168 58 77 42 0 0 0.651 0.225 0.298 0.163 0.000 0.000 chr7 128949185 129060111
view TNRC18 152 29 61 45 0 0 0.589 0.112 0.236 0.174 0.000 0.000 chr7 5301811 5428834