Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TMEM59 180 67 75 35 0 0 0.698 0.260 0.291 0.136 0.000 0.000 chr1 54021681 54058204
view TMEM60 199 61 57 42 0 0 0.771 0.236 0.221 0.163 0.000 0.000 chr7 77788728 77803434
view TMEM61 217 80 40 25 1 0 0.841 0.310 0.155 0.097 0.004 0.000 chr1 54975628 54997288
view TMEM62 171 64 69 30 0 0 0.663 0.248 0.267 0.116 0.000 0.000 chr15 43128586 43190144
view TMEM63A 212 77 38 24 0 0 0.822 0.298 0.147 0.093 0.000 0.000 chr1 225840536 225887380
view TMEM63B 200 67 49 32 0 0 0.775 0.260 0.190 0.124 0.000 0.000 chr6 44122554 44160519
view TMEM63C 160 39 71 53 0 0 0.620 0.151 0.275 0.205 0.000 0.000 chr14 77176798 77264495
view TMEM64 173 56 75 44 1 0 0.671 0.217 0.291 0.171 0.004 0.000 chr8 90617000 90651083
view TMEM65 173 64 69 33 0 0 0.671 0.248 0.267 0.128 0.000 0.000 chr8 124301189 124377701
view TMEM67 158 50 79 43 0 0 0.612 0.194 0.306 0.167 0.000 0.000 chr8 93749894 93823121
view TMEM68 185 61 59 36 0 0 0.717 0.236 0.229 0.140 0.000 0.000 chr8 55733758 55778378
view TMEM69 175 55 80 48 0 0 0.678 0.213 0.310 0.186 0.000 0.000 chr1 45683181 45699436
view TMEM70 200 67 51 31 1 1 0.775 0.260 0.198 0.120 0.004 0.004 chr8 73971195 73987783
view TMEM71 188 70 57 28 0 0 0.729 0.271 0.221 0.109 0.000 0.000 chr8 132704941 132765582
view TMEM72 202 71 48 29 1 1 0.783 0.275 0.186 0.112 0.004 0.004 chr10 44906337 44942010
view TMEM74B 221 76 35 27 0 0 0.857 0.295 0.136 0.105 0.000 0.000 chr20 1175570 1189981
view TMEM74 204 76 51 27 0 0 0.791 0.295 0.198 0.105 0.000 0.000 chr8 108773974 108792594
view TMEM79 188 64 65 36 0 0 0.729 0.248 0.252 0.140 0.000 0.000 chr1 156279325 156297443
view TMEM80 201 62 47 36 0 0 0.779 0.240 0.182 0.140 0.000 0.000 chr11 690816 709129
view TMEM81 202 69 54 34 0 0 0.783 0.267 0.209 0.132 0.000 0.000 chr1 205078129 205089460
view TMEM82 193 52 61 49 0 0 0.748 0.202 0.236 0.190 0.000 0.000 chr1 15737499 15752982
view TMEM86A 233 89 21 14 1 0 0.903 0.345 0.081 0.054 0.004 0.000 chr11 18693779 18709785
view TMEM86B 214 68 38 33 0 0 0.829 0.264 0.147 0.128 0.000 0.000 chr19 55221638 55233763
view TMEM87A 164 49 77 44 0 0 0.636 0.190 0.298 0.171 0.000 0.000 chr15 42205447 42278433
view TMEM87B 157 42 70 45 0 0 0.609 0.163 0.271 0.174 0.000 0.000 chr2 112050269 112124314
view TMEM88B 1 0 18 8 0 0 0.004 0.000 0.070 0.031 0.000 0.000 chr1 1420871 1435255
view TMEM88 215 72 43 33 0 0 0.833 0.279 0.167 0.128 0.000 0.000 chr17 7850066 7861099
view TMEM89 155 46 99 55 0 0 0.601 0.178 0.384 0.213 0.000 0.000 chr3 48615759 48626769
view TMEM8B 207 75 45 27 0 0 0.802 0.291 0.174 0.105 0.000 0.000 chr9 35824228 35870515
view TMEM91 196 64 56 38 0 0 0.760 0.248 0.217 0.147 0.000 0.000 chr19 41371533 41389083
view TMEM92 240 92 16 11 0 0 0.930 0.357 0.062 0.043 0.000 0.000 chr17 50269466 50286485
view TMEM94 176 59 71 39 0 0 0.682 0.229 0.275 0.151 0.000 0.000 chr17 75451635 75505452
view TMEM95 215 66 34 30 0 0 0.833 0.256 0.132 0.116 0.000 0.000 chr17 7350156 7362219
view TMEM97 186 62 68 42 0 0 0.721 0.240 0.264 0.163 0.000 0.000 chr17 28314200 28333685
view TMEM98 200 66 54 36 0 0 0.775 0.256 0.209 0.140 0.000 0.000 chr17 32923153 32949315
view TMEM9B 220 83 33 18 0 0 0.853 0.322 0.128 0.070 0.000 0.000 chr11 8942202 8969442
view TMEM9 214 76 41 26 0 0 0.829 0.295 0.159 0.101 0.000 0.000 chr1 201129772 201159474
view TMF1 200 75 48 24 0 0 0.775 0.291 0.186 0.093 0.000 0.000 chr3 69014827 69057333
view TMIE 215 74 38 27 1 1 0.833 0.287 0.147 0.105 0.004 0.004 chr3 46696392 46715886
view TMIGD1 173 43 71 50 1 1 0.671 0.167 0.275 0.194 0.004 0.004 chr17 30311333 30339057
view TMIGD2 217 71 33 26 0 0 0.841 0.275 0.128 0.101 0.000 0.000 chr19 4287227 4307389
view TMIGD3 231 89 24 13 0 0 0.895 0.345 0.093 0.050 0.000 0.000 chr1 111478348 111508633
view TMLHE 48 8 187 80 0 0 0.186 0.031 0.725 0.310 0.000 0.000 chrX 155484011 155617952
view TMOD1 166 44 57 42 0 0 0.643 0.171 0.221 0.163 0.000 0.000 chr9 97496666 97606743
view TMOD2 186 69 59 31 1 1 0.721 0.267 0.229 0.120 0.004 0.004 chr15 51746597 51821363
view TMOD3 185 64 63 36 0 0 0.717 0.248 0.244 0.140 0.000 0.000 chr15 51824653 51920725
view TMOD4 202 68 53 36 0 0 0.783 0.264 0.205 0.140 0.000 0.000 chr1 151164987 151180981
view TMPO 187 60 56 34 0 0 0.725 0.233 0.217 0.132 0.000 0.000 chr12 98510590 98555351
view TMPPE 232 88 25 16 0 0 0.899 0.341 0.097 0.062 0.000 0.000 chr3 33085422 33102146
view TMPRSS11A 196 68 51 29 0 0 0.760 0.264 0.198 0.112 0.000 0.000 chr4 67904395 67968493