regionname | pos | ref | alt | annotation | impact | samples | ahapids | achapids | acthapids | actghapids | ac | an | af | len | hgvs_c | hgvs_p | genename | geneid | featuretype | featureid | transcript_biotype | rank | cdna cdna pos length
|
cds cds pos length
|
aa aa pos length
|
distance | status | chr | external |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ANKDD1B_chr5_75606453_75676846 | 75669297 | G | A | stop_gained | HIGH | HG00099.hp2 HG00140.hp2 HG00408.hp1 others(139): Show |
a0001a0006a0007others(10): Show | a0001c0001a0001c0019a0001c0035others(13): Show | a0001c0001t0001a0001c0001t0006a0001c0001t0017others(20): Show | a0001c0001t0001g0001a0001c0001t0001g0009a0001c0001t0001g0010others(122): Show | 142 | 372 | 0.3817 | 0 | c.143 others(4): Show |
p.Trp others(4): Show |
ANKDD1B | ENSG00000189045.15 | transcript | ENST00000601380.4 | protein_coding | 13/14 | 1621/2575 | 1439/1587 | 480/528 | chr5 | TogoVar | ||
AQP12B_chr2_240671418_240687885 | 240682382 | GC | G | frameshift_variant | HIGH | HG02622.hp1 NA18906.hp2 NA18974.hp2 others(1): Show |
a0006 | a0006c0006 | a0006c0006t0002 | a0006c0006t0002g0025a0006c0006t0002g0075a0006c0006t0002g0076 | 4 | 179 | 0.0224 | -1 | c.455 others(4): Show |
p.Ser others(5): Show |
AQP12B | ENSG00000185176.13 | transcript | ENST00000407834.4 | protein_coding | 1/3 | 503/1099 | 455/924 | 152/307 | chr2 | TogoVar | ||
ASAH2B_chr10_50734936_50764255 | 50745132 | T | C | start_lost | HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(344): Show |
a0001 | a0001c0001a0001c0003a0001c0004 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(59): Show | a0001c0001t0001g0001a0001c0001t0001g0008a0001c0001t0001g0010others(135): Show | 347 | 414 | 0.8382 | 0 | c.2T> others(1): Show |
p.Met others(2): Show |
ASAH2B | ENSG00000204147.11 | transcript | ENST00000647317.2 | protein_coding | 3/6 | 149/5145 | 2/483 | 1/160 | chr10 | TogoVar | ||
AVPI1_chr10_97672424_97692241 | 97679916 | C | G | splice_acceptor_variant others(1): Show |
HIGH | HG00099.hp1 HG00280.hp2 HG00408.hp1 others(98): Show |
a0001 | a0001c0001 | a0001c0001t0001a0001c0001t0002a0001c0001t0007 | a0001c0001t0001g0001a0001c0001t0001g0006a0001c0001t0001g0009others(48): Show | 101 | 446 | 0.2265 | 0 | c.-10 others(5): Show |
AVPI1 | ENSG00000119986.7 | transcript | ENST00000370626.4 | protein_coding | 1/2 | chr10 | TogoVar | ||||||
AWAT2_chrX_70035542_70054938 | 70041920 | TG | T | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | -1 | c.889 others(4): Show |
p.Gln others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 7/8 | 895/2124 | 889/1002 | 297/333 | chrX | TogoVar | ||
AWAT2_chrX_70035542_70054938 | 70041933 | CA | C | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | -1 | c.876 others(4): Show |
p.Ile others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 7/8 | 882/2124 | 876/1002 | 292/333 | chrX | TogoVar | ||
AWAT2_chrX_70035542_70054938 | 70042185 | A | AC | splice_donor_variant others(1): Show |
HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | 1 | c.847 others(6): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 6/7 | chrX | TogoVar | ||||||
AWAT2_chrX_70035542_70054938 | 70042320 | A | AG | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | 1 | c.713 others(4): Show |
p.Gly others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 6/8 | 719/2124 | 713/1002 | 238/333 | chrX | TogoVar | ||
AWAT2_chrX_70035542_70054938 | 70043153 | GC | G | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | -1 | c.562 others(4): Show |
p.Ala others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 5/8 | 568/2124 | 562/1002 | 188/333 | chrX | TogoVar | ||
AWAT2_chrX_70035542_70054938 | 70043177 | A | AC | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | 1 | c.538 others(4): Show |
p.Val others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 5/8 | 544/2124 | 538/1002 | 180/333 | chrX | TogoVar | ||
AWAT2_chrX_70035542_70054938 | 70043208 | GA | G | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | -1 | c.507 others(4): Show |
p.Leu others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 5/8 | 513/2124 | 507/1002 | 169/333 | chrX | TogoVar | ||
AWAT2_chrX_70035542_70054938 | 70043639 | A | AG | frameshift_variant | HIGH | NA19059.hp2 | a0003 | a0003c0003 | a0003c0003t0006 | a0003c0003t0006g0024 | 1 | 338 | 0.0030 | 1 | c.310 others(4): Show |
p.Leu others(5): Show |
AWAT2 | ENSG00000147160.9 | transcript | ENST00000276101.7 | protein_coding | 4/8 | 316/2124 | 310/1002 | 104/333 | chrX | TogoVar | ||
BMP15_chrX_50905735_50921641 | 50916280 | CG | C | frameshift_variant | HIGH | NA19059.hp2 | a0008 | a0008c0009 | a0008c0009t0001 | a0008c0009t0001g0023 | 1 | 294 | 0.0034 | -1 | c.855 others(4): Show |
p.Pro others(5): Show |
BMP15 | ENSG00000130385.6 | transcript | ENST00000252677.4 | protein_coding | 2/2 | 904/1262 | 855/1179 | 285/392 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
BMP15_chrX_50905735_50921641 | 50916361 | T | TC | frameshift_variant | HIGH | NA19059.hp2 | a0008 | a0008c0009 | a0008c0009t0001 | a0008c0009t0001g0023 | 1 | 294 | 0.0034 | 1 | c.938 others(4): Show |
p.Tyr others(5): Show |
BMP15 | ENSG00000130385.6 | transcript | ENST00000252677.4 | protein_coding | 2/2 | 988/1262 | 939/1179 | 313/392 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
BMP15_chrX_50905735_50921641 | 50916428 | TC | T | frameshift_variant | HIGH | NA19059.hp1 | a0009 | a0009c0010 | a0009c0010t0001 | a0009c0010t0001g0040 | 1 | 294 | 0.0034 | -1 | c.100 others(5): Show |
p.Asn others(5): Show |
BMP15 | ENSG00000130385.6 | transcript | ENST00000252677.4 | protein_coding | 2/2 | 1054/1262 | 1005/1179 | 335/392 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
BRDT_chr1_91944401_92019421 | 91977038 | TGTAGGTT others(20): Show |
T | frameshift_variant others(3): Show |
HIGH | NA19059.hp1 | a0012 | a0012c0016 | a0012c0016t0002 | a0012c0016t0002g0069 | 1 | 318 | 0.0031 | -27 | c.619 others(36): Show |
p.Val others(5): Show |
BRDT | ENSG00000137948.19 | transcript | ENST00000399546.7 | protein_coding | 6/19 | 619/2844 | 207/947 | chr1 | TogoVar | |||
C13orf46_chr13_113948705_113979076 | 113968465 | A | G | splice_donor_variant others(1): Show |
HIGH | HG00099.hp1 HG00099.hp2 HG00140.hp1 others(403): Show |
a0001a0002a0003others(4): Show | a0001c0001a0001c0008a0002c0002others(5): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(115): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0008others(241): Show | 406 | 414 | 0.9807 | 0 | c.456 others(5): Show |
C13orf46 | ENSG00000283199.3 | transcript | ENST00000636427.3 | protein_coding | 4/6 | chr13 | TogoVar | ||||||
CFAP53_chr18_50222193_50271495 | 50238649 | CATTTATG others(114): Show |
C | frameshift_variant others(3): Show |
HIGH | NA19059.hp2 | a0007 | a0007c0015 | a0007c0015t0001 | a0007c0015t0001g0112 | 1 | 402 | 0.0025 | -121 | c.121 others(12): Show |
p.Leu others(5): Show |
CFAP53 | ENSG00000172361.6 | transcript | ENST00000398545.5 | protein_coding | 7/8 | 1360/1824 | 1214/1545 | 405/514 | chr18 | TogoVar | ||
CXorf65_chrX_71098889_71111740 | 71104076 | TG | T | frameshift_variant | HIGH | NA19059.hp2 | a0006 | a0006c0005 | a0006c0005t0001 | a0006c0005t0001g0028 | 1 | 287 | 0.0035 | -1 | c.462 others(4): Show |
p.Thr others(5): Show |
CXorf65 | ENSG00000204165.6 | transcript | ENST00000374251.6 | protein_coding | 6/6 | 646/834 | 462/552 | 154/183 | chrX | TogoVar | ||
CXorf65_chrX_71098889_71111740 | 71104083 | CT | C | frameshift_variant | HIGH | NA19059.hp2 | a0006 | a0006c0005 | a0006c0005t0001 | a0006c0005t0001g0028 | 1 | 287 | 0.0035 | -1 | c.455 others(4): Show |
p.Lys others(5): Show |
CXorf65 | ENSG00000204165.6 | transcript | ENST00000374251.6 | protein_coding | 6/6 | 639/834 | 455/552 | 152/183 | chrX | TogoVar | ||
CXorf65_chrX_71098889_71111740 | 71104377 | AG | A | frameshift_variant | HIGH | NA19059.hp2 | a0006 | a0006c0005 | a0006c0005t0001 | a0006c0005t0001g0028 | 1 | 287 | 0.0035 | -1 | c.346 others(4): Show |
p.Leu others(5): Show |
CXorf65 | ENSG00000204165.6 | transcript | ENST00000374251.6 | protein_coding | 5/6 | 530/834 | 346/552 | 116/183 | chrX | TogoVar | ||
CXorf65_chrX_71098889_71111740 | 71104805 | CA | C | frameshift_variant | HIGH | NA19059.hp2 | a0006 | a0006c0005 | a0006c0005t0001 | a0006c0005t0001g0028 | 1 | 287 | 0.0035 | -1 | c.282 others(4): Show |
p.Phe others(4): Show |
CXorf65 | ENSG00000204165.6 | transcript | ENST00000374251.6 | protein_coding | 4/6 | 466/834 | 282/552 | 94/183 | chrX | TogoVar | ||
CYLC2_chr9_102990333_103023488 | 103016962 | G | A | splice_donor_variant others(1): Show |
HIGH | HG00140.hp1 HG00140.hp2 HG00280.hp1 others(409): Show |
a0001a0002a0003others(11): Show | a0001c0001a0001c0005a0002c0002others(12): Show | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(65): Show | a0001c0001t0001g0002a0001c0001t0001g0004a0001c0001t0001g0010others(317): Show | 412 | 448 | 0.9196 | 0 | c.*89 others(6): Show |
CYLC2 | ENSG00000155833.15 | transcript | ENST00000374798.8 | protein_coding | 7/7 | chr9 | TogoVar | ||||||
DDX53_chrX_22994960_23008589 | 23000966 | AC | A | frameshift_variant | HIGH | NA19059.hp1 | a0008 | a0008c0008 | a0008c0008t0024 | a0008c0008t0024g0000 | 1 | 358 | 0.0028 | -1 | c.912 others(4): Show |
p.Thr others(5): Show |
DDX53 | ENSG00000184735.7 | transcript | ENST00000327968.7 | protein_coding | 1/1 | 1010/3630 | 912/1896 | 304/631 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
DEFB126_chr20_137590_150751 | 145669 | ACC | A | frameshift_variant | HIGH | HG00099.hp1 HG00099.hp2 HG00323.hp1 others(230): Show |
a0000a0002 | a0000c0002a0000c0004a0002c0003others(2): Show | a0000c0002t0001a0000c0004t0001a0002c0003t0001others(2): Show | a0000c0002t0001g0001a0000c0002t0001g0002a0000c0002t0001g0003others(16): Show | 233 | 460 | 0.5065 | -2 | c.317 others(9): Show |
p.Pro others(5): Show |
DEFB126 | ENSG00000125788.6 | transcript | ENST00000382398.4 | protein_coding | 2/2 | 356/434 | 317/336 | 106/111 | INFO_REALIGN_3_PRIME | chr20 | TogoVar | |
DFFA_chr1_10451522_10477529 | 10472433 | A | AC | frameshift_variant | HIGH | HG00408.hp1 HG00423.hp1 HG00423.hp2 others(192): Show |
a0002 | a0002c0002a0002c0004a0002c0006others(5): Show | a0002c0002t0001a0002c0002t0002a0002c0002t0003others(57): Show | a0002c0002t0001g0001a0002c0002t0001g0004a0002c0002t0001g0008others(124): Show | 195 | 438 | 0.4452 | 1 | c.25d others(3): Show |
p.Val others(3): Show |
DFFA | ENSG00000160049.12 | transcript | ENST00000377038.8 | protein_coding | 1/6 | 96/6035 | 25/996 | 9/331 | chr1 | TogoVar | ||
ESM1_chr5_54972867_54990593 | 54985255 | CCATTAGA others(7): Show |
C | frameshift_variant | HIGH | NA19059.hp2 | a0005 | a0005c0004 | a0005c0004t0001 | a0005c0004t0001g0027 | 1 | 446 | 0.0022 | -14 | c.249 others(21): Show |
p.Cys others(4): Show |
ESM1 | ENSG00000164283.13 | transcript | ENST00000381405.5 | protein_coding | 1/3 | 338/2096 | 249/555 | 83/184 | chr5 | TogoVar | ||
FAM110C_chr2_33814_51505 | 46307 | C | CG | frameshift_variant | HIGH | NA18947.hp2 NA18976.hp2 NA18978.hp1 others(4): Show |
a0003 | a0003c0003 | a0003c0003t0001a0003c0003t0002a0003c0003t0003 | a0003c0003t0001g0017a0003c0003t0002g0033a0003c0003t0003g0018 | 7 | 442 | 0.0158 | 1 | c.78d others(3): Show |
p.Asp others(4): Show |
FAM110C | ENSG00000184731.6 | transcript | ENST00000327669.5 | protein_coding | 1/2 | 198/3880 | 78/966 | 26/321 | chr2 | TogoVar | ||
FAM90A19_chr8_7748682_7761692 | 7755067 | T | C | splice_donor_variant others(1): Show |
HIGH | HG00423.hp1 HG00423.hp2 HG00558.hp1 others(70): Show |
a0001a0003a0005others(25): Show | a0001c0001a0001c0033a0003c0003others(26): Show | a0001c0001t0000a0001c0033t0000a0003c0003t0000others(26): Show | a0001c0001t0000g0002a0001c0001t0000g0004a0001c0001t0000g0005others(48): Show | 73 | 116 | 0.6293 | 0 | c.432 others(5): Show |
FAM90A19 | ENSG00000285657.1 | transcript | ENST00000647903.1 | protein_coding | 3/3 | chr8 | TogoVar | ||||||
FGF16_chrX_77442389_77462278 | 77447834 | GC | G | frameshift_variant | HIGH | NA19059.hp1 | a0003 | a0003c0003 | a0003c0003t0004 | a0003c0003t0004g0041 | 1 | 309 | 0.0032 | -1 | c.163 others(4): Show |
p.His others(4): Show |
FGF16 | ENSG00000196468.8 | transcript | ENST00000439435.3 | protein_coding | 1/3 | 449/1666 | 163/624 | 55/207 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GABRQ_chrX_152632895_152662542 | 152640458 | AT | A | frameshift_variant | HIGH | NA19059.hp2 | a0006 | a0006c0004 | a0006c0004t0002 | a0006c0004t0002g0110 | 1 | 298 | 0.0034 | -1 | c.234 others(4): Show |
p.Phe others(4): Show |
GABRQ | ENSG00000268089.3 | transcript | ENST00000598523.3 | protein_coding | 2/9 | 542/6468 | 234/1899 | 78/632 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
GLA_chrX_101392803_101412925 | 101398783 | AC | A | splice_donor_variant others(1): Show |
HIGH | NA19059.hp1 | a0001 | a0001c0001 | a0001c0001t0001 | a0001c0001t0001g0082 | 1 | 318 | 0.0031 | -1 | c.801 others(6): Show |
GLA | ENSG00000102393.15 | transcript | ENST00000218516.4 | protein_coding | 5/6 | chrX | TogoVar | ||||||
GOLGA8S_chr15_23349748_23373341 | 23364403 | G | T | stop_gained | HIGH | HG00280.hp1 HG00438.hp1 HG00544.hp1 others(75): Show |
a0002a0013a0016others(17): Show | a0002c0002a0002c0086a0002c0087others(23): Show | a0002c0002t0001a0002c0002t0020a0002c0086t0001others(24): Show | a0002c0002t0001g0004a0002c0002t0001g0011a0002c0002t0001g0018others(61): Show | 78 | 430 | 0.1814 | 0 | c.144 others(4): Show |
p.Glu others(4): Show |
GOLGA8S | ENSG00000261739.3 | transcript | ENST00000562295.3 | protein_coding | 16/19 | 1509/5186 | 1447/1917 | 483/638 | chr15 | TogoVar | ||
GPANK1_chr6_31656228_31669997 | 31664358 | G | A | stop_gained | HIGH | NA19058.hp2 NA19059.hp2 |
a0007 | a0007c0012 | a0007c0012t0001 | a0007c0012t0001g0039 | 2 | 433 | 0.0046 | 0 | c.121 others(3): Show |
p.Arg others(3): Show |
GPANK1 | ENSG00000204438.11 | transcript | ENST00000375896.9 | protein_coding | 2/3 | 377/2365 | 121/1071 | 41/356 | chr6 | TogoVar | ||
GPR78_chr4_8575392_8595023 | 8582572 | A | AC | frameshift_variant | HIGH | HG00621.hp1 HG02080.hp2 HG04115.hp1 others(16): Show |
a0004 | a0004c0004 | a0004c0004t0001a0004c0004t0002a0004c0004t0003others(8): Show | a0004c0004t0001g0009a0004c0004t0001g0175a0004c0004t0002g0001others(15): Show | 19 | 462 | 0.0411 | 1 | c.712 others(4): Show |
p.Arg others(5): Show |
GPR78 | ENSG00000155269.12 | transcript | ENST00000382487.5 | protein_coding | 2/3 | 1304/4343 | 713/1092 | 238/363 | INFO_REALIGN_3_PRIME | chr4 | TogoVar | |
GSC2_chr22_19141993_19155292 | 19149662 | C | T | splice_donor_variant others(1): Show |
HIGH | NA18974.hp2 NA18975.hp1 NA18997.hp1 others(2): Show |
a0002 | a0002c0002 | a0002c0002t0002 | a0002c0002t0002g0008 | 5 | 470 | 0.0106 | 0 | c.513 others(5): Show |
GSC2 | ENSG00000063515.3 | transcript | ENST00000086933.3 | protein_coding | 2/2 | chr22 | TogoVar | ||||||
HSD17B13_chr4_87298794_87327882 | 87310240 | T | TA | splice_donor_variant others(1): Show |
HIGH | HG00140.hp1 HG00280.hp2 HG00423.hp1 others(93): Show |
a0001a0006a0007 | a0001c0001a0006c0008a0007c0010 | a0001c0001t0001a0001c0001t0002a0006c0008t0001others(1): Show | a0001c0001t0001g0001a0001c0001t0001g0002a0001c0001t0001g0004others(71): Show | 96 | 442 | 0.2172 | 1 | c.812 others(6): Show |
HSD17B13 | ENSG00000170509.12 | transcript | ENST00000328546.5 | protein_coding | 6/6 | chr4 | TogoVar | ||||||
IRF2BP1_chr19_45878608_45891141 | 45884308 | A | AC | frameshift_variant | HIGH | HG00735.hp2 HG01099.hp1 HG01099.hp2 others(11): Show |
a0003a0004a0006others(1): Show | a0003c0007a0004c0008a0006c0016others(1): Show | a0003c0007t0001a0003c0007t0002a0004c0008t0001others(2): Show | a0003c0007t0001g0000a0003c0007t0002g0000a0004c0008t0001g0000others(2): Show | 14 | 416 | 0.0337 | 1 | c.146 others(5): Show |
p.Gly others(5): Show |
IRF2BP1 | ENSG00000170604.5 | transcript | ENST00000302165.5 | protein_coding | 1/1 | 1833/2534 | 1466/1755 | 489/584 | chr19 | TogoVar | ||
ITM2A_chrX_79355384_79372334 | 79363512 | TC | T | frameshift_variant | HIGH | NA19059.hp1 | a0003 | a0003c0003 | a0003c0003t0002 | a0003c0003t0002g0041 | 1 | 334 | 0.0030 | -1 | c.153 others(4): Show |
p.Arg others(4): Show |
ITM2A | ENSG00000078596.11 | transcript | ENST00000373298.7 | protein_coding | 2/6 | 272/1616 | 153/792 | 51/263 | chrX | TogoVar | ||
LILRA2_chr19_54568790_54595287 | 54587200 | G | A | splice_acceptor_variant others(1): Show |
HIGH | HG00544.hp2 HG00558.hp2 HG00597.hp2 others(65): Show |
a0001a0014a0017others(1): Show | a0001c0001a0014c0021a0017c0023others(1): Show | a0001c0001t0003a0001c0001t0010a0001c0001t0035others(3): Show | a0001c0001t0003g0001a0001c0001t0003g0018a0001c0001t0003g0019others(14): Show | 68 | 427 | 0.1593 | 0 | c.130 others(6): Show |
LILRA2 | ENSG00000239998.7 | transcript | ENST00000391738.8 | protein_coding | 7/7 | chr19 | TogoVar | ||||||
LOC102725191_chr7_12499441_12546270 | 12523234 | G | GA | frameshift_variant | HIGH | HG00099.hp2 HG00408.hp1 HG00423.hp2 others(120): Show |
a0001 | a0001c0001a0001c0007a0001c0008 | a0001c0001t0001a0001c0001t0002a0001c0001t0003others(2): Show | a0001c0001t0001g0004a0001c0001t0001g0010a0001c0001t0001g0011others(95): Show | 123 | 422 | 0.2915 | 1 | c.274 others(4): Show |
p.Ile others(4): Show |
LOC102725191 | ENSG00000226690.9 | transcript | ENST00000636804.2 | protein_coding | 2/6 | 378/1221 | 275/771 | 92/256 | INFO_REALIGN_3_PRIME | chr7 | TogoVar | |
LOC122319696_chrX_149409877_149420506 | 149415054 | T | TA | frameshift_variant | HIGH | NA19059.hp1 | a0004 | a0004c0008 | a0004c0008t0001 | a0004c0008t0001g0011 | 1 | 313 | 0.0032 | 1 | c.236 others(4): Show |
p.Arg others(4): Show |
LOC122319696 | ENSG00000287585.2 | transcript | ENST00000653668.2 | protein_coding | 2/2 | 265/443 | 236/285 | 79/94 | chrX | TogoVar | ||
LPCAT3_chr12_6971185_7023476 | 6977132 | AC | A | splice_donor_variant others(1): Show |
HIGH | HG02258.hp1 HG02965.hp1 HG03486.hp1 others(16): Show |
a0002 | a0002c0004 | a0002c0004t0002 | a0002c0004t0002g0001a0002c0004t0002g0005a0002c0004t0002g0026others(12): Show | 19 | 282 | 0.0674 | -1 | c.*12 others(6): Show |
LPCAT3 | ENSG00000111684.11 | transcript | ENST00000261407.9 | protein_coding | 12/12 | chr12 | TogoVar | ||||||
MAGEA4_chrX_151907889_151930170 | 151923880 | A | AC | frameshift_variant | HIGH | NA19059.hp1 | a0007 | a0007c0013 | a0007c0013t0002 | a0007c0013t0002g0085 | 1 | 344 | 0.0029 | 1 | c.219 others(4): Show |
p.Thr others(4): Show |
MAGEA4 | ENSG00000147381.12 | transcript | ENST00000276344.6 | protein_coding | 3/3 | 438/1724 | 220/954 | 74/317 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
MAGEB3_chrX_30225657_30242495 | 30236488 | C | CA | frameshift_variant | HIGH | NA19059.hp1 | a0009 | a0009c0011 | a0009c0011t0002 | a0009c0011t0002g0086 | 1 | 338 | 0.0030 | 1 | c.566 others(4): Show |
p.Asn others(5): Show |
MAGEB3 | ENSG00000198798.6 | transcript | ENST00000361644.4 | protein_coding | 5/5 | 1083/2087 | 567/1041 | 189/346 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
MAGEB3_chrX_30225657_30242495 | 30236518 | TC | T | frameshift_variant | HIGH | NA19059.hp1 | a0009 | a0009c0011 | a0009c0011t0002 | a0009c0011t0002g0086 | 1 | 338 | 0.0030 | -1 | c.597 others(4): Show |
p.Lys others(5): Show |
MAGEB3 | ENSG00000198798.6 | transcript | ENST00000361644.4 | protein_coding | 5/5 | 1113/2087 | 597/1041 | 199/346 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
MAGEB3_chrX_30225657_30242495 | 30236647 | TG | T | frameshift_variant | HIGH | NA19059.hp2 | a0008 | a0008c0009 | a0008c0009t0005 | a0008c0009t0005g0063 | 1 | 338 | 0.0030 | -1 | c.727 others(4): Show |
p.Glu others(5): Show |
MAGEB3 | ENSG00000198798.6 | transcript | ENST00000361644.4 | protein_coding | 5/5 | 1243/2087 | 727/1041 | 243/346 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
MED12_chrX_71113596_71147450 | 71122306 | AC | A | frameshift_variant | HIGH | NA19059.hp2 | a0004 | a0004c0023 | a0004c0023t0001 | a0004c0023t0001g0047 | 1 | 273 | 0.0037 | -1 | c.121 others(5): Show |
p.Leu others(5): Show |
MED12 | ENSG00000184634.17 | transcript | ENST00000374080.8 | protein_coding | 8/45 | 1369/6925 | 1210/6534 | 404/2177 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
MED12_chrX_71113596_71147450 | 71123710 | TC | T | frameshift_variant | HIGH | NA19059.hp2 | a0004 | a0004c0023 | a0004c0023t0001 | a0004c0023t0001g0047 | 1 | 273 | 0.0037 | -1 | c.173 others(5): Show |
p.Met others(5): Show |
MED12 | ENSG00000184634.17 | transcript | ENST00000374080.8 | protein_coding | 12/45 | 1896/6925 | 1737/6534 | 579/2177 | INFO_REALIGN_3_PRIME | chrX | TogoVar | |
MED12_chrX_71113596_71147450 | 71133169 | CA | C | frameshift_variant | HIGH | NA19059.hp2 | a0004 | a0004c0023 | a0004c0023t0001 | a0004c0023t0001g0047 | 1 | 273 | 0.0037 | -1 | c.457 others(5): Show |
p.Lys others(6): Show |
MED12 | ENSG00000184634.17 | transcript | ENST00000374080.8 | protein_coding | 33/45 | 4736/6925 | 4577/6534 | 1526/2177 | INFO_REALIGN_3_PRIME | chrX | TogoVar |