Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02615	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0018	GWD	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02615	hp1	a0002	a0002c0004	a0002c0004t0045	a0002c0004t0045g0200	GWD	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0276	GWD	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0272	GWD	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02615	hp2	a0002	a0002c0003	a0002c0003t0004	a0002c0003t0004g0031	GWD	AFR	A2ML1	chr12	8817621	8881787
A4GALT_chr22_42687121_42725870	HG02615	hp1	a0004	a0004c0005	a0004c0005t0010	a0004c0005t0010g0086	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02615	hp2	a0001	a0001c0009	a0001c0009t0013	a0001c0009t0013g0364	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02615	hp1	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0047	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0117	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02615	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0020	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	GWD	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0054	GWD	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02615	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0212	GWD	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0121	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02615	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0066	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	GWD	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	GWD	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02615	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	GWD	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0077	GWD	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0188	GWD	AFR	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG02615	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0074	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0343	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02615	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0013	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	GWD	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02615	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0292	GWD	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	GWD	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	GWD	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02615	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0025	GWD	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02615	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02615	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0033	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AATF_chr17_36943954_37061871	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	GWD	AFR	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	HG02615	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	GWD	AFR	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	HG02615	hp1	a0008	a0008c0010	a0008c0010t0002	a0008c0010t0002g0199	GWD	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02615	hp2	a0003	a0003c0027	a0003c0027t0001	a0003c0027t0001g0323	GWD	AFR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02615	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0246	GWD	AFR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02615	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0302	GWD	AFR	ABAT	chr16	8669617	8789570
ABCA12_chr2_214926542_215143626	HG02615	hp1	a0001	a0001c0010	a0001c0010t0004	a0001c0010t0004g0113	GWD	AFR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02615	hp2	a0003	a0003c0067	a0003c0067t0025	a0003c0067t0025g0183	GWD	AFR	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG02615	hp1	a0077	a0077c0082	a0077c0082t0005	a0077c0082t0005g0146	GWD	AFR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG02615	hp2	a0009	a0009c0107	a0009c0107t0001	a0009c0107t0001g0112	GWD	AFR	ABCA13	chr7	48166458	48652497