Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG00423	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0088	CHS	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	CHS	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG00423	hp1	a0001	a0001c0001	a0001c0001t0032	a0001c0001t0032g0058	CHS	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG00423	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0072	CHS	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG00423	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0337	CHS	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG00423	hp2	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0301	CHS	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0251	CHS	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG00423	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0095	CHS	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG00423	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0192	CHS	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG00423	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0110	CHS	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG00423	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0008	CHS	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG00423	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0080	CHS	EAS	A4GALT	chr22	42687121	42725870
AADACL2_chr3_151728927_151766339	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG00423	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0063	CHS	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG00423	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	CHS	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG00423	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	CHS	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG00423	hp2	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0004	CHS	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0170	CHS	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	CHS	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0171	CHS	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG00423	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0037	CHS	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG00423	hp2	a0005	a0005c0012	a0005c0012t0001	a0005c0012t0001g0001	CHS	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0177	CHS	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	CHS	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG00423	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0008	CHS	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG00423	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0019	CHS	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0024	CHS	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	CHS	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	CHS	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	CHS	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG00423	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0146	CHS	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG00423	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0138	CHS	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG00423	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0242	CHS	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG00423	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0295	CHS	EAS	AASS	chr7	122068549	122149249
ABCA12_chr2_214926542_215143626	HG00423	hp1	a0015	a0015c0045	a0015c0045t0002	a0015c0045t0002g0162	CHS	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG00423	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0147	CHS	EAS	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG00423	hp1	a0005	a0005c0014	a0005c0014t0006	a0005c0014t0006g0052	CHS	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG00423	hp2	a0003	a0003c0002	a0003c0002t0014	a0003c0002t0014g0066	CHS	EAS	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	HG00423	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0040	CHS	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0272	CHS	EAS	ABCA4	chr1	93987834	94126148
ABCA8_chr17_68862289_68960392	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0234	CHS	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	HG00423	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	CHS	EAS	ABCA8	chr17	68862289	68960392
ABCB1_chr7_87498017_87605884	HG00423	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0303	CHS	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	HG00423	hp2	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0019	CHS	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	HG00423	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0202	CHS	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	HG00423	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0012	CHS	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	HG00423	hp1	a0016	a0016c0021	a0016c0021t0014	a0016c0021t0014g0105	CHS	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	HG00423	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0267	CHS	EAS	ABCB5	chr7	20610667	20762008