Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18941	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18941	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0157	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0140	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18941	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0197	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18941	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0243	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18941	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0322	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18941	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0115	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18941	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0040	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18941	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0058	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18941	hp1	a0002	a0002c0002	a0002c0002t0058	a0002c0002t0058g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18941	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18941	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0034	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18941	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18941	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0013	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0303	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18941	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0257	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18941	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0059	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0315	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA18941	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18941	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0241	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18941	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18941	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18941	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0129	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA1_chr9_104776006_104933155	NA18941	hp1	a0003	a0003c0009	a0003c0009t0006	a0003c0009t0006g0186	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18941	hp2	a0012	a0012c0040	a0012c0040t0029	a0012c0040t0029g0001	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA8_chr17_68862289_68960392	NA18941	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0070	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18941	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0264	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB1_chr7_87498017_87605884	NA18941	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0229	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18941	hp2	a0002	a0002c0009	a0002c0009t0001	a0002c0009t0001g0324	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB6_chr2_219204772_219223958	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB9_chr12_122923992_122971463	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC10_chr6_43422541_43455427	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0046	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA18941	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0104	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC3_chr17_50629881_50697253	NA18941	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0190	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18941	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	JPT	EAS	ABCC3	chr17	50629881	50697253