Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18944	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0002	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18944	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0157	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18944	hp1	a0002	a0002c0007	a0002c0007t0001	a0002c0007t0001g0228	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18944	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0106	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0253	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18944	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0054	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18944	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0002	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18944	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0197	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18944	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0157	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0331	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18944	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0117	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18944	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18944	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0009	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18944	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18944	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18944	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18944	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0274	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0275	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0180	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0366	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18944	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0303	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18944	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0308	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18944	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0021	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0009	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18944	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0040	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18944	hp2	a0001	a0001c0001	a0001c0001t0012	a0001c0001t0012g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18944	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0111	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18944	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0285	JPT	EAS	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	NA18944	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0189	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18944	hp2	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0123	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	NA18944	hp1	a0001	a0001c0010	a0001c0010t0001	a0001c0010t0001g0066	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18944	hp2	a0006	a0006c0007	a0006c0007t0003	a0006c0007t0003g0137	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA18944	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0211	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18944	hp2	a0006	a0006c0012	a0006c0012t0002	a0006c0012t0002g0028	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	NA18944	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0085	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18944	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0236	JPT	EAS	ABCA3	chr16	2270881	2345728