Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18957	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0032	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18957	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0134	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18957	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0043	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18957	hp1	a0001	a0001c0012	a0001c0012t0005	a0001c0012t0005g0058	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18957	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0091	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18957	hp1	a0001	a0001c0017	a0001c0017t0002	a0001c0017t0002g0204	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18957	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0314	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18957	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0031	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18957	hp2	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0043	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18957	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0028	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18957	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	NA18957	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0088	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0317	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18957	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0024	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18957	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18957	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0013	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18957	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0302	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18957	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0224	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18957	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0007	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18957	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0267	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA18957	hp1	a0001	a0001c0001	a0001c0001t0040	a0001c0001t0040g0292	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18957	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0120	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18957	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0281	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18957	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0098	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA18957	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0286	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18957	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0221	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18957	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0132	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18957	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0240	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18957	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18957	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0025	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18957	hp1	a0001	a0001c0003	a0001c0003t0002	a0001c0003t0002g0086	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18957	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0109	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18957	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0215	JPT	EAS	ABCA9	chr17	68969488	69065927