Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18959	hp1	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0293	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18959	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0229	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18959	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0022	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18959	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0008	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18959	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0112	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18959	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0231	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0305	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18959	hp1	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0030	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA18959	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18959	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18959	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0213	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0313	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18959	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0224	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18959	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0238	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18959	hp1	a0004	a0004c0006	a0004c0006t0001	a0004c0006t0001g0028	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18959	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18959	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0144	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AARSD1_chr17_42945526_42969454	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0111	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	NA18959	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0324	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA18959	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0110	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18959	hp2	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0253	JPT	EAS	AATK	chr17	81112295	81171221
ABCA13_chr7_48166458_48652497	NA18959	hp1	a0038	a0038c0108	a0038c0108t0001	a0038c0108t0001g0113	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18959	hp2	a0011	a0011c0017	a0011c0017t0002	a0011c0017t0002g0048	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA2_chr9_137002234_137033237	NA18959	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0089	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	NA18959	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0072	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	NA18959	hp1	a0002	a0002c0010	a0002c0010t0001	a0002c0010t0001g0058	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0273	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA18959	hp1	a0002	a0002c0001	a0002c0001t0009	a0002c0001t0009g0260	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18959	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0119	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18959	hp1	a0005	a0005c0005	a0005c0005t0002	a0005c0005t0002g0007	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18959	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0214	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18959	hp1	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0267	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18959	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB11_chr2_168915781_169036324	NA18959	hp1	a0002	a0002c0004	a0002c0004t0005	a0002c0004t0005g0236	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18959	hp2	a0001	a0001c0002	a0001c0002t0015	a0001c0002t0015g0207	JPT	EAS	ABCB11	chr2	168915781	169036324