Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18974	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0287	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18974	hp2	a0001	a0001c0003	a0001c0003t0007	a0001c0003t0007g0231	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0281	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18974	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0186	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18974	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0014	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18974	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18974	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0159	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18974	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0307	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18974	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0097	JPT	EAS	A4GNT	chr3	138118713	138137390
AADACL2_chr3_151728927_151766339	NA18974	hp1	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18974	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL4_chr1_12639085_12672076	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0255	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18974	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18974	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0134	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18974	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0027	JPT	EAS	AAMDC	chr11	77816144	77877352
AARD_chr8_116933207_116949487	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18974	hp1	a0001	a0001c0018	a0001c0018t0003	a0001c0018t0003g0070	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18974	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0162	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA18974	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0298	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18974	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0034	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA2_chr9_137002234_137033237	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA4_chr1_93987834_94126148	NA18974	hp1	a0001	a0001c0004	a0001c0004t0002	a0001c0004t0002g0235	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18974	hp2	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0156	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA6_chr17_69073702_69146895	NA18974	hp1	a0008	a0008c0008	a0008c0008t0002	a0008c0008t0002g0018	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18974	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0207	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0259	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18974	hp2	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0009	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB4_chr7_87396696_87480680	NA18974	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0065	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18974	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0143	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0277	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18974	hp2	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0322	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA18974	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB8_chr7_151023450_151052782	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18974	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB9_chr12_122923992_122971463	NA18974	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA18974	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0221	JPT	EAS	ABCB9	chr12	122923992	122971463