Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0108	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18977	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0071	JPT	EAS	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	NA18977	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0006	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18977	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0139	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18977	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18977	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0007	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA18977	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0176	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18977	hp2	a0001	a0001c0004	a0001c0004t0004	a0001c0004t0004g0250	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18977	hp1	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18977	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0059	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0198	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0199	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18977	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0032	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18977	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0017	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0049	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18977	hp1	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0266	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18977	hp2	a0002	a0002c0002	a0002c0002t0013	a0002c0002t0013g0134	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA18977	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0086	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA18977	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0230	JPT	EAS	AAK1	chr2	69452997	69648739
AAR2_chr20_36231478_36261933	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA18977	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18977	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18977	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0114	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18977	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0020	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA18977	hp1	a0004	a0004c0005	a0004c0005t0001	a0004c0005t0001g0258	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18977	hp2	a0001	a0001c0011	a0001c0011t0001	a0001c0011t0001g0267	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18977	hp1	a0002	a0002c0005	a0002c0005t0004	a0002c0005t0004g0190	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18977	hp2	a0002	a0002c0002	a0002c0002t0009	a0002c0002t0009g0086	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA18977	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0125	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18977	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0287	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18977	hp2	a0005	a0005c0005	a0005c0005t0003	a0005c0005t0003g0132	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA2_chr9_137002234_137033237	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	NA18977	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0001	JPT	EAS	ABCA2	chr9	137002234	137033237
ABCA5_chr17_69239311_69332133	NA18977	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0296	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18977	hp2	a0011	a0011c0018	a0011c0018t0001	a0011c0018t0001g0148	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18977	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0191	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18977	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB10_chr1_229511582_229563707	NA18977	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18977	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0071	JPT	EAS	ABCB10	chr1	229511582	229563707