Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0268	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18982	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0047	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18982	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0001	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18982	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0249	JPT	EAS	A3GALT2	chr1	33301766	33326098
AAAS_chr12_53302460_53326610	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18982	hp1	a0002	a0002c0002	a0002c0002t0011	a0002c0002t0011g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18982	hp2	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0017	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18982	hp2	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0178	JPT	EAS	AADACL4	chr1	12639085	12672076
AAGAB_chr15_67195667_67259661	NA18982	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0216	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0340	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0361	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0217	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18982	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18982	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18982	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0078	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18982	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18982	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0173	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18982	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0237	JPT	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	NA18982	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0171	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA18982	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0170	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18982	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA18982	hp1	a0013	a0013c0013	a0013c0013t0003	a0013c0013t0003g0256	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18982	hp2	a0016	a0016c0019	a0016c0019t0006	a0016c0019t0006g0250	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA5_chr17_69239311_69332133	NA18982	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0161	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18982	hp2	a0008	a0008c0012	a0008c0012t0023	a0008c0012t0023g0278	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA18982	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0226	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18982	hp1	a0011	a0011c0013	a0011c0013t0001	a0011c0013t0001g0092	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18982	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0074	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0213	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18982	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0111	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB1_chr7_87498017_87605884	NA18982	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0219	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18982	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB6_chr2_219204772_219223958	NA18982	hp1	a0006	a0006c0005	a0006c0005t0001	a0006c0005t0001g0017	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18982	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0137	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA18982	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18982	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB9_chr12_122923992_122971463	NA18982	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	JPT	EAS	ABCB9	chr12	122923992	122971463