Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA19067	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0327	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19067	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0331	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA19067	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0053	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19067	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA19067	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19067	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0005	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19067	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0320	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19067	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0181	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA19067	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19067	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0020	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19067	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0074	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19067	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0012	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19067	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0212	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19067	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0113	JPT	EAS	AAGAB	chr15	67195667	67259661
AANAT_chr17_76462603_76475117	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19067	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19067	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0005	JPT	EAS	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	NA19067	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0020	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	JPT	EAS	AASDHPPT	chr11	106072662	106103695
ABCA9_chr17_68969488_69065927	NA19067	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0157	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0255	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB5_chr7_20610667_20762008	NA19067	hp1	a0003	a0003c0002	a0003c0002t0001	a0003c0002t0001g0321	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19067	hp2	a0002	a0002c0014	a0002c0014t0003	a0002c0014t0003g0002	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA19067	hp1	a0004	a0004c0007	a0004c0007t0005	a0004c0007t0005g0174	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19067	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB9_chr12_122923992_122971463	NA19067	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0194	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0184	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC3_chr17_50629881_50697253	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC5_chr3_183914934_184022884	NA19067	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0082	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA19067	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0144	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC8_chr11_17387885_17481845	NA19067	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0106	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA19067	hp2	a0001	a0001c0024	a0001c0024t0001	a0001c0024t0001g0154	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD1_chrX_153719856_153749755	NA19067	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD2_chr12_39545033_39624803	NA19067	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0166	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19067	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0064	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD4_chr14_74280269_74307934	NA19067	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0079	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA19067	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0205	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCF1_chr6_30566442_30596522	NA19067	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0017	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF2_chr7_151206484_151232205	NA19067	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0010	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA19067	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF2	chr7	151206484	151232205