Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0246	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19086	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0173	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0224	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19086	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0006	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA19086	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0315	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19086	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0084	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA19086	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0149	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19086	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19086	hp1	a0002	a0002c0022	a0002c0022t0002	a0002c0022t0002g0020	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19086	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19086	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19086	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0234	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19086	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0247	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0126	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19086	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0086	JPT	EAS	AAMDC	chr11	77816144	77877352
AARD_chr8_116933207_116949487	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19086	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0003	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19086	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0094	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0083	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19086	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19086	hp1	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0236	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19086	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0124	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19086	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0262	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0045	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA19086	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0157	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19086	hp2	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0033	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA5_chr17_69239311_69332133	NA19086	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0318	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19086	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0137	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19086	hp1	a0011	a0011c0014	a0011c0014t0002	a0011c0014t0002g0253	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19086	hp2	a0008	a0008c0008	a0008c0008t0002	a0008c0008t0002g0135	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19086	hp1	a0005	a0005c0006	a0005c0006t0001	a0005c0006t0001g0283	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19086	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB4_chr7_87396696_87480680	NA19086	hp1	a0002	a0002c0005	a0002c0005t0001	a0002c0005t0001g0052	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	NA19086	hp1	a0003	a0003c0010	a0003c0010t0002	a0003c0010t0002g0328	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19086	hp2	a0021	a0021c0033	a0021c0033t0003	a0021c0033t0003g0037	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0163	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC10_chr6_43422541_43455427	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0069	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC3_chr17_50629881_50697253	NA19086	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA19086	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0080	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC5_chr3_183914934_184022884	NA19086	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0215	JPT	EAS	ABCC5	chr3	183914934	184022884