Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01517	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0024	IBS	EUR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	IBS	EUR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	IBS	EUR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01517	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0015	IBS	EUR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01517	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0106	IBS	EUR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01517	hp2	a0001	a0001c0001	a0001c0001t0008	a0001c0001t0008g0100	IBS	EUR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01517	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0013	IBS	EUR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0035	IBS	EUR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG01517	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0209	IBS	EUR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG01517	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0248	IBS	EUR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG01517	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0165	IBS	EUR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01517	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0343	IBS	EUR	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	HG01517	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0274	IBS	EUR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG01517	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0206	IBS	EUR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG01517	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0008	IBS	EUR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01517	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0042	IBS	EUR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	IBS	EUR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01517	hp2	a0001	a0001c0012	a0001c0012t0008	a0001c0012t0008g0032	IBS	EUR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG01517	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	IBS	EUR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	IBS	EUR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	IBS	EUR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0014	IBS	EUR	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0136	IBS	EUR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0338	IBS	EUR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	IBS	EUR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	IBS	EUR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01517	hp1	a0002	a0002c0002	a0002c0002t0005	a0002c0002t0005g0002	IBS	EUR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	IBS	EUR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01517	hp2	a0006	a0006c0008	a0006c0008t0001	a0006c0008t0001g0019	IBS	EUR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	IBS	EUR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0130	IBS	EUR	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	IBS	EUR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG01517	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0197	IBS	EUR	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG01517	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0002	IBS	EUR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG01517	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0017	IBS	EUR	AATK	chr17	81112295	81171221
ABCA12_chr2_214926542_215143626	HG01517	hp1	a0001	a0001c0031	a0001c0031t0005	a0001c0031t0005g0158	IBS	EUR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG01517	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0028	IBS	EUR	ABCA12	chr2	214926542	215143626
ABCA1_chr9_104776006_104933155	HG01517	hp1	a0014	a0014c0023	a0014c0023t0017	a0014c0023t0017g0105	IBS	EUR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	IBS	EUR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01517	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	IBS	EUR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01517	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0007	IBS	EUR	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG01517	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0233	IBS	EUR	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG01517	hp2	a0002	a0002c0010	a0002c0010t0001	a0002c0010t0001g0150	IBS	EUR	ABCA3	chr16	2270881	2345728
ABCA4_chr1_93987834_94126148	HG01517	hp1	a0020	a0020c0030	a0020c0030t0001	a0020c0030t0001g0251	IBS	EUR	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	HG01517	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0168	IBS	EUR	ABCA4	chr1	93987834	94126148