Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG01952	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0009	PEL	AMR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0235	PEL	AMR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG01952	hp1	a0017	a0017c0018	a0017c0018t0004	a0017c0018t0004g0118	PEL	AMR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG01952	hp2	a0029	a0029c0050	a0029c0050t0001	a0029c0050t0001g0203	PEL	AMR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG01952	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0057	PEL	AMR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG01952	hp2	a0003	a0003c0004	a0003c0004t0001	a0003c0004t0001g0001	PEL	AMR	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	HG01952	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0050	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG01952	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0293	PEL	AMR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PEL	AMR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	PEL	AMR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	PEL	AMR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG01952	hp1	a0002	a0002c0002	a0002c0002t0038	a0002c0002t0038g0004	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	PEL	AMR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG01952	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0083	PEL	AMR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0099	PEL	AMR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG01952	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	PEL	AMR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG01952	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0055	PEL	AMR	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	HG01952	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0225	PEL	AMR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG01952	hp2	a0005	a0005c0010	a0005c0010t0010	a0005c0010t0010g0142	PEL	AMR	AAK1	chr2	69452997	69648739
AAMP_chr2_218259129_218275137	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0042	PEL	AMR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	PEL	AMR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	PEL	AMR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	PEL	AMR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG01952	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0293	PEL	AMR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	PEL	AMR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG01952	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	PEL	AMR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	PEL	AMR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	PEL	AMR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PEL	AMR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG01952	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	PEL	AMR	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	PEL	AMR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG01952	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0006	PEL	AMR	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	HG01952	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0063	PEL	AMR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG01952	hp2	a0001	a0001c0001	a0001c0001t0025	a0001c0001t0025g0264	PEL	AMR	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG01952	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0268	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG01952	hp2	a0003	a0003c0003	a0003c0003t0005	a0003c0003t0005g0322	PEL	AMR	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	HG01952	hp1	a0030	a0030c0042	a0030c0042t0004	a0030c0042t0004g0073	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG01952	hp2	a0023	a0023c0018	a0023c0018t0001	a0023c0018t0001g0110	PEL	AMR	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	HG01952	hp1	a0004	a0004c0043	a0004c0043t0003	a0004c0043t0003g0136	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG01952	hp2	a0012	a0012c0093	a0012c0093t0001	a0012c0093t0001g0108	PEL	AMR	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG01952	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	PEL	AMR	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG01952	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	PEL	AMR	ABCA2	chr9	137002234	137033237