Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18978	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0171	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18978	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0009	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18978	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0143	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0290	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18978	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18978	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0205	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	NA18978	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18978	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0053	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0107	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18978	hp1	a0001	a0001c0001	a0001c0001t0018	a0001c0001t0018g0053	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18978	hp2	a0002	a0002c0002	a0002c0002t0012	a0002c0002t0012g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18978	hp1	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0016	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0244	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0217	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18978	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA18978	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0088	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18978	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0222	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMP_chr2_218259129_218275137	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA18978	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0077	JPT	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	NA18978	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0215	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA18978	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0020	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18978	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0109	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18978	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0199	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18978	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0108	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA1_chr9_104776006_104933155	NA18978	hp1	a0006	a0006c0063	a0006c0063t0003	a0006c0063t0003g0151	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18978	hp2	a0016	a0016c0019	a0016c0019t0018	a0016c0019t0018g0131	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA3_chr16_2270881_2345728	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18978	hp2	a0010	a0010c0027	a0010c0027t0003	a0010c0027t0003g0018	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA8_chr17_68862289_68960392	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0236	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18978	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0072	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCB11_chr2_168915781_169036324	NA18978	hp1	a0002	a0002c0004	a0002c0004t0035	a0002c0004t0035g0080	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18978	hp2	a0012	a0012c0029	a0012c0029t0001	a0012c0029t0001g0108	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB6_chr2_219204772_219223958	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0054	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCC1_chr16_15944616_16148053	NA18978	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0132	JPT	EAS	ABCC1	chr16	15944616	16148053
ABCC1_chr16_15944616_16148053	NA18978	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0218	JPT	EAS	ABCC1	chr16	15944616	16148053
ABCC2_chr10_99777640_99857594	NA18978	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0228	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18978	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0035	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC6_chr16_16144565_16228494	NA18978	hp1	a0006	a0006c0009	a0006c0009t0001	a0006c0009t0001g0120	JPT	EAS	ABCC6	chr16	16144565	16228494
ABCC6_chr16_16144565_16228494	NA18978	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0334	JPT	EAS	ABCC6	chr16	16144565	16228494