Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA18981	hp1	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0002	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18981	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0014	JPT	EAS	A1CF	chr10	50794409	50890627
A2M_chr12_9062708_9120919	NA18981	hp1	a0007	a0007c0027	a0007c0027t0001	a0007c0027t0001g0277	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA18981	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0015	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18981	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0061	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA18981	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0089	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA18981	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0182	JPT	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0186	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA18981	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0043	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18981	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0132	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA18981	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18981	hp2	a0006	a0006c0008	a0006c0008t0008	a0006c0008t0008g0009	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0081	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18981	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0020	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18981	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0088	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18981	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0012	JPT	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0185	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18981	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0050	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18981	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18981	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0008	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18981	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18981	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0052	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
ABCA10_chr17_69143007_69233824	NA18981	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0083	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18981	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0017	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	NA18981	hp1	a0001	a0001c0040	a0001c0040t0008	a0001c0040t0008g0186	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	NA18981	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0163	JPT	EAS	ABCA12	chr2	214926542	215143626
ABCB6_chr2_219204772_219223958	NA18981	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0065	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB8_chr7_151023450_151052782	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18981	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0092	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB9_chr12_122923992_122971463	NA18981	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0203	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA18981	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0171	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC2_chr10_99777640_99857594	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0221	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18981	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0194	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC3_chr17_50629881_50697253	NA18981	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0046	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18981	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0242	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC5_chr3_183914934_184022884	NA18981	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0039	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18981	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0012	JPT	EAS	ABCC5	chr3	183914934	184022884