Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA18987	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0109	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0216	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA18987	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0307	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18987	hp2	a0002	a0002c0007	a0002c0007t0003	a0002c0007t0003g0329	JPT	EAS	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	NA18987	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0056	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18987	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0119	JPT	EAS	A3GALT2	chr1	33301766	33326098
AAAS_chr12_53302460_53326610	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0068	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18987	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18987	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0170	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18987	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18987	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18987	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0147	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0335	JPT	EAS	AAGAB	chr15	67195667	67259661
AARS1_chr16_70247298_70294506	NA18987	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0223	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	JPT	EAS	AARS1	chr16	70247298	70294506
AASDHPPT_chr11_106072662_106103695	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18987	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0202	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDH	chr4	56333290	56392491
ABCA10_chr17_69143007_69233824	NA18987	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0092	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18987	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0068	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA13_chr7_48166458_48652497	NA18987	hp1	a0023	a0023c0018	a0023c0018t0004	a0023c0018t0004g0091	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18987	hp2	a0019	a0019c0030	a0019c0030t0003	a0019c0030t0003g0038	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA6_chr17_69073702_69146895	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA18987	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0164	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0245	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA18987	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0085	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA9_chr17_68969488_69065927	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0248	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA18987	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0197	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB11_chr2_168915781_169036324	NA18987	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0210	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18987	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0271	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCC2_chr10_99777640_99857594	NA18987	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0058	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC2_chr10_99777640_99857594	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0298	JPT	EAS	ABCC2	chr10	99777640	99857594
ABCC6_chr16_16144565_16228494	NA18987	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0204	JPT	EAS	ABCC6	chr16	16144565	16228494
ABCC6_chr16_16144565_16228494	NA18987	hp2	a0001	a0001c0028	a0001c0028t0001	a0001c0028t0001g0295	JPT	EAS	ABCC6	chr16	16144565	16228494
ABCC8_chr11_17387885_17481845	NA18987	hp1	a0002	a0002c0018	a0002c0018t0001	a0002c0018t0001g0190	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCC8_chr11_17387885_17481845	NA18987	hp2	a0010	a0010c0066	a0010c0066t0001	a0010c0066t0001g0174	JPT	EAS	ABCC8	chr11	17387885	17481845
ABCD3_chr1_94413389_94523663	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA18987	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0320	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCE1_chr4_145093311_145134524	NA18987	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCE1	chr4	145093311	145134524
ABCE1_chr4_145093311_145134524	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABCE1	chr4	145093311	145134524
ABCF1_chr6_30566442_30596522	NA18987	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0058	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCF1_chr6_30566442_30596522	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0218	JPT	EAS	ABCF1	chr6	30566442	30596522
ABCG1_chr21_42214140_42302244	NA18987	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0261	JPT	EAS	ABCG1	chr21	42214140	42302244
ABCG1_chr21_42214140_42302244	NA18987	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0231	JPT	EAS	ABCG1	chr21	42214140	42302244