Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A3GALT2_chr1_33301766_33326098	NA18988	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0004	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18988	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0011	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18988	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0155	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18988	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0067	JPT	EAS	A4GALT	chr22	42687121	42725870
AACS_chr12_125060435_125148316	NA18988	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0171	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA18988	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0114	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA18988	hp1	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0003	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18988	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0031	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18988	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0008	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0243	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18988	hp2	a0001	a0001c0004	a0001c0004t0001	a0001c0004t0001g0331	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0173	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18988	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0325	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18988	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA18988	hp1	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0008	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18988	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA18988	hp1	a0010	a0010c0014	a0010c0014t0001	a0010c0014t0001g0110	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18988	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0236	JPT	EAS	AARS1	chr16	70247298	70294506
AASS_chr7_122068549_122149249	NA18988	hp1	a0001	a0001c0001	a0001c0001t0030	a0001c0001t0030g0158	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18988	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0305	JPT	EAS	AASS	chr7	122068549	122149249
ABCA10_chr17_69143007_69233824	NA18988	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0082	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA18988	hp2	a0012	a0012c0011	a0012c0011t0002	a0012c0011t0002g0077	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCB11_chr2_168915781_169036324	NA18988	hp1	a0002	a0002c0008	a0002c0008t0001	a0002c0008t0001g0288	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18988	hp2	a0002	a0002c0031	a0002c0031t0002	a0002c0031t0002g0237	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB1_chr7_87498017_87605884	NA18988	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0304	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	NA18988	hp2	a0003	a0003c0004	a0003c0004t0005	a0003c0004t0005g0013	JPT	EAS	ABCB1	chr7	87498017	87605884
ABCB4_chr7_87396696_87480680	NA18988	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0084	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18988	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0015	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	NA18988	hp1	a0013	a0013c0023	a0013c0023t0001	a0013c0023t0001g0213	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18988	hp2	a0012	a0012c0013	a0012c0013t0001	a0012c0013t0001g0101	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB6_chr2_219204772_219223958	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB6_chr2_219204772_219223958	NA18988	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0012	JPT	EAS	ABCB6	chr2	219204772	219223958
ABCB7_chrX_75046048_75161283	NA18988	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0196	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC3_chr17_50629881_50697253	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0192	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC3_chr17_50629881_50697253	NA18988	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0131	JPT	EAS	ABCC3	chr17	50629881	50697253
ABCC4_chr13_95014835_95306451	NA18988	hp1	a0002	a0002c0005	a0002c0005t0002	a0002c0005t0002g0092	JPT	EAS	ABCC4	chr13	95014835	95306451
ABCC4_chr13_95014835_95306451	NA18988	hp2	a0001	a0001c0002	a0001c0002t0014	a0001c0002t0014g0184	JPT	EAS	ABCC4	chr13	95014835	95306451
ABCC5_chr3_183914934_184022884	NA18988	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0007	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC5_chr3_183914934_184022884	NA18988	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0092	JPT	EAS	ABCC5	chr3	183914934	184022884
ABCC9_chr12_21792389_21946426	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	JPT	EAS	ABCC9	chr12	21792389	21946426
ABCC9_chr12_21792389_21946426	NA18988	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	JPT	EAS	ABCC9	chr12	21792389	21946426
ABCD1_chrX_153719856_153749755	NA18988	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD2_chr12_39545033_39624803	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0241	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA18988	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0290	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD4_chr14_74280269_74307934	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCD4_chr14_74280269_74307934	NA18988	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0144	JPT	EAS	ABCD4	chr14	74280269	74307934
ABCE1_chr4_145093311_145134524	NA18988	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCE1	chr4	145093311	145134524
ABCE1_chr4_145093311_145134524	NA18988	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCE1	chr4	145093311	145134524