Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0013	JPT	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	NA18995	hp1	a0002	a0002c0017	a0002c0017t0002	a0002c0017t0002g0227	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18995	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0324	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18995	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0064	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18995	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0006	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18995	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0112	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18995	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0175	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18995	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0179	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18995	hp2	a0001	a0001c0002	a0001c0002t0006	a0001c0002t0006g0004	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL3_chr1_12711110_12733760	NA18995	hp1	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0005	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18995	hp2	a0001	a0001c0002	a0001c0002t0009	a0001c0002t0009g0073	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0197	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18995	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18995	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0095	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0116	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18995	hp1	a0003	a0003c0005	a0003c0005t0001	a0003c0005t0001g0027	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AARD_chr8_116933207_116949487	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA18995	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARSD1_chr17_42945526_42969454	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA18995	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASS_chr7_122068549_122149249	NA18995	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0020	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18995	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0027	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0296	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18995	hp2	a0007	a0007c0008	a0007c0008t0001	a0007c0008t0001g0091	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18995	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0252	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA3_chr16_2270881_2345728	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0229	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0079	JPT	EAS	ABCA3	chr16	2270881	2345728
ABCA5_chr17_69239311_69332133	NA18995	hp1	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0307	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA18995	hp2	a0001	a0001c0006	a0001c0006t0007	a0001c0006t0007g0106	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCB4_chr7_87396696_87480680	NA18995	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0083	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA18995	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0148	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB5_chr7_20610667_20762008	NA18995	hp1	a0008	a0008c0009	a0008c0009t0001	a0008c0009t0001g0350	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA18995	hp2	a0008	a0008c0027	a0008c0027t0002	a0008c0027t0002g0314	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA18995	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA18995	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB9_chr12_122923992_122971463	NA18995	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0017	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCB9_chr12_122923992_122971463	NA18995	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0169	JPT	EAS	ABCB9	chr12	122923992	122971463
ABCC10_chr6_43422541_43455427	NA18995	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0161	JPT	EAS	ABCC10	chr6	43422541	43455427