Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

Sort By

Choose a field to sort by.

Order by

Ascending / Descending.

Show

Results per page.

⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2ML1_chr12_8817621_8881787	NA18998	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0059	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA18998	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0152	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0166	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA18998	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0041	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA18998	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0136	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA18998	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0107	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA18998	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0039	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	JPT	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	NA18998	hp1	a0001	a0001c0001	a0001c0001t0030	a0001c0001t0030g0067	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA18998	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0003	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0243	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA18998	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA18998	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA18998	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0280	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0291	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0203	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0333	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AANAT	chr17	76462603	76475117
AARS1_chr16_70247298_70294506	NA18998	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0334	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA18998	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0276	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA18998	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0026	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA18998	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA18998	hp2	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0311	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA18998	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0197	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	JPT	EAS	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	NA18998	hp1	a0003	a0003c0009	a0003c0009t0001	a0003c0009t0001g0158	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA18998	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0279	JPT	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	NA18998	hp1	a0002	a0002c0005	a0002c0005t0016	a0002c0005t0016g0072	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA18998	hp2	a0001	a0001c0001	a0001c0001t0023	a0001c0001t0023g0212	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA13_chr7_48166458_48652497	NA18998	hp1	a0066	a0066c0062	a0066c0062t0003	a0066c0062t0003g0141	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	NA18998	hp2	a0009	a0009c0012	a0009c0012t0002	a0009c0012t0002g0052	JPT	EAS	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	NA18998	hp1	a0009	a0009c0027	a0009c0027t0006	a0009c0027t0006g0224	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	NA18998	hp1	a0001	a0001c0007	a0001c0007t0001	a0001c0007t0001g0037	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCB10_chr1_229511582_229563707	NA18998	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0096	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA18998	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB11_chr2_168915781_169036324	NA18998	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0256	JPT	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	NA18998	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0076	JPT	EAS	ABCB11	chr2	168915781	169036324