Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19006	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0091	JPT	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	NA19006	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0009	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19006	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0187	JPT	EAS	A1CF	chr10	50794409	50890627
AADACL3_chr1_12711110_12733760	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19006	hp2	a0002	a0002c0003	a0002c0003t0005	a0002c0003t0005g0005	JPT	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	NA19006	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AAK1_chr2_69452997_69648739	NA19006	hp1	a0002	a0002c0002	a0002c0002t0132	a0002c0002t0132g0236	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19006	hp2	a0007	a0007c0018	a0007c0018t0002	a0007c0018t0002g0165	JPT	EAS	AAK1	chr2	69452997	69648739
AASS_chr7_122068549_122149249	NA19006	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0319	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0361	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19006	hp2	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0165	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19006	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0103	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19006	hp2	a0012	a0012c0011	a0012c0011t0002	a0012c0011t0002g0055	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA6_chr17_69073702_69146895	NA19006	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0028	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0085	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCB10_chr1_229511582_229563707	NA19006	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0206	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB10_chr1_229511582_229563707	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0221	JPT	EAS	ABCB10	chr1	229511582	229563707
ABCB5_chr7_20610667_20762008	NA19006	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0040	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	NA19006	hp2	a0003	a0003c0010	a0003c0010t0001	a0003c0010t0001g0240	JPT	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0171	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCC9_chr12_21792389_21946426	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	JPT	EAS	ABCC9	chr12	21792389	21946426
ABCC9_chr12_21792389_21946426	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0012	JPT	EAS	ABCC9	chr12	21792389	21946426
ABCD1_chrX_153719856_153749755	NA19006	hp1	a0002	a0002c0012	a0002c0012t0011	a0002c0012t0011g0025	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCD2_chr12_39545033_39624803	NA19006	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0004	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD2_chr12_39545033_39624803	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	JPT	EAS	ABCD2	chr12	39545033	39624803
ABCD3_chr1_94413389_94523663	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0087	JPT	EAS	ABCD3	chr1	94413389	94523663
ABCD3_chr1_94413389_94523663	NA19006	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0298	JPT	EAS	ABCD3	chr1	94413389	94523663
ABHD13_chr13_108213392_108239243	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0067	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	NA19006	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD15_chr17_29555547_29572037	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD15	chr17	29555547	29572037
ABHD15_chr17_29555547_29572037	NA19006	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0006	JPT	EAS	ABHD15	chr17	29555547	29572037
ABHD16A_chr6_31681955_31708324	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0127	JPT	EAS	ABHD16A	chr6	31681955	31708324
ABHD16A_chr6_31681955_31708324	NA19006	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0011	JPT	EAS	ABHD16A	chr6	31681955	31708324
ABHD1_chr2_27118815_27135812	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	ABHD1	chr2	27118815	27135812
ABHD1_chr2_27118815_27135812	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0017	JPT	EAS	ABHD1	chr2	27118815	27135812
ABHD4_chr14_22593300_22617963	NA19006	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0145	JPT	EAS	ABHD4	chr14	22593300	22617963
ABHD4_chr14_22593300_22617963	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ABHD4	chr14	22593300	22617963
ABHD6_chr3_58232792_58299734	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0195	JPT	EAS	ABHD6	chr3	58232792	58299734
ABHD6_chr3_58232792_58299734	NA19006	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0074	JPT	EAS	ABHD6	chr3	58232792	58299734
ABITRAM_chr9_108929400_108945954	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0019	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABITRAM_chr9_108929400_108945954	NA19006	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABRA_chr8_106754483_106775244	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABRA	chr8	106754483	106775244
ABRA_chr8_106754483_106775244	NA19006	hp2	a0004	a0004c0007	a0004c0007t0001	a0004c0007t0001g0034	JPT	EAS	ABRA	chr8	106754483	106775244
ACAA2_chr18_49777164_49818533	NA19006	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0279	JPT	EAS	ACAA2	chr18	49777164	49818533
ACAA2_chr18_49777164_49818533	NA19006	hp2	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0065	JPT	EAS	ACAA2	chr18	49777164	49818533
ACAD11_chr3_132553141_132664809	NA19006	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0250	JPT	EAS	ACAD11	chr3	132553141	132664809
ACAD11_chr3_132553141_132664809	NA19006	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	JPT	EAS	ACAD11	chr3	132553141	132664809