Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	NA19063	hp1	a0001	a0001c0001	a0001c0001t0019	a0001c0001t0019g0087	JPT	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0011	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0201	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA19063	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0144	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19063	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0321	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19063	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0207	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19063	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0214	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19063	hp1	a0004	a0004c0004	a0004c0004t0004	a0004c0004t0004g0005	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19063	hp2	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0010	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0110	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19063	hp2	a0004	a0004c0007	a0004c0007t0004	a0004c0007t0004g0108	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0204	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19063	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0017	JPT	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19063	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0163	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0316	JPT	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	NA19063	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0149	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19063	hp2	a0001	a0001c0001	a0001c0001t0102	a0001c0001t0102g0113	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0154	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0147	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAR2_chr20_36231478_36261933	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0052	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0060	JPT	EAS	AAR2	chr20	36231478	36261933
AARS1_chr16_70247298_70294506	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	JPT	EAS	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0027	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19063	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0003	JPT	EAS	AARS2	chr6	44293731	44318347
AASDHPPT_chr11_106072662_106103695	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19063	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19063	hp1	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0225	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19063	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0192	JPT	EAS	AASDH	chr4	56333290	56392491
ABAT_chr16_8669617_8789570	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0283	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19063	hp2	a0001	a0001c0003	a0001c0003t0004	a0001c0003t0004g0103	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19063	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0018	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19063	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0028	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA4_chr1_93987834_94126148	NA19063	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0021	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19063	hp2	a0004	a0004c0044	a0004c0044t0002	a0004c0044t0002g0190	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19063	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0094	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19063	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0243	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19063	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19063	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0009	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19063	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0071	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19063	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0242	JPT	EAS	ABCA8	chr17	68862289	68960392