Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A2M_chr12_9062708_9120919	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0031	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	JPT	EAS	A2M	chr12	9062708	9120919
A4GALT_chr22_42687121_42725870	NA19068	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0148	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19068	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0027	JPT	EAS	A4GALT	chr22	42687121	42725870
AAAS_chr12_53302460_53326610	NA19068	hp1	a0001	a0001c0006	a0001c0006t0001	a0001c0006t0001g0017	JPT	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	JPT	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	NA19068	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0151	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0190	JPT	EAS	AACS	chr12	125060435	125148316
AADACL3_chr1_12711110_12733760	NA19068	hp1	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0011	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	JPT	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AADACL4	chr1	12639085	12672076
AADAT_chr4_170055222_170094956	NA19068	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0013	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0168	JPT	EAS	AADAT	chr4	170055222	170094956
AAK1_chr2_69452997_69648739	NA19068	hp1	a0001	a0001c0001	a0001c0001t0034	a0001c0001t0034g0267	JPT	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	NA19068	hp2	a0001	a0001c0001	a0001c0001t0101	a0001c0001t0101g0118	JPT	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	NA19068	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0057	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0133	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	NA19068	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0231	JPT	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	NA19068	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0235	JPT	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19068	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0053	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19068	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0060	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AATF_chr17_36943954_37061871	NA19068	hp1	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0100	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0211	JPT	EAS	AATF	chr17	36943954	37061871
AATK_chr17_81112295_81171221	NA19068	hp1	a0034	a0034c0038	a0034c0038t0001	a0034c0038t0001g0169	JPT	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	NA19068	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0010	JPT	EAS	AATK	chr17	81112295	81171221
ABCA10_chr17_69143007_69233824	NA19068	hp1	a0004	a0004c0006	a0004c0006t0003	a0004c0006t0003g0122	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19068	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0107	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA19068	hp1	a0004	a0004c0008	a0004c0008t0006	a0004c0008t0006g0202	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19068	hp2	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0129	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA6_chr17_69073702_69146895	NA19068	hp1	a0004	a0004c0004	a0004c0004t0002	a0004c0004t0002g0019	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19068	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0224	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0252	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19068	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0113	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCB4_chr7_87396696_87480680	NA19068	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0005	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB4_chr7_87396696_87480680	NA19068	hp2	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0118	JPT	EAS	ABCB4	chr7	87396696	87480680
ABCB7_chrX_75046048_75161283	NA19068	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0033	JPT	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	NA19068	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCB8_chr7_151023450_151052782	NA19068	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0068	JPT	EAS	ABCB8	chr7	151023450	151052782
ABCC10_chr6_43422541_43455427	NA19068	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0094	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC10_chr6_43422541_43455427	NA19068	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0063	JPT	EAS	ABCC10	chr6	43422541	43455427
ABCC1_chr16_15944616_16148053	NA19068	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0011	JPT	EAS	ABCC1	chr16	15944616	16148053