Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19075	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	A1CF	chr10	50794409	50890627
AADACL2_chr3_151728927_151766339	NA19075	hp1	a0001	a0001c0001	a0001c0001t0049	a0001c0001t0049g0002	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19075	hp2	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0006	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAT_chr4_170055222_170094956	NA19075	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0142	JPT	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	JPT	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19075	hp2	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0192	JPT	EAS	AAGAB	chr15	67195667	67259661
AANAT_chr17_76462603_76475117	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	NA19075	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	JPT	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	NA19075	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0002	JPT	EAS	AARS2	chr6	44293731	44318347
AASDH_chr4_56333290_56392491	NA19075	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0318	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0071	JPT	EAS	AASDH	chr4	56333290	56392491
AATF_chr17_36943954_37061871	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0218	JPT	EAS	AATF	chr17	36943954	37061871
AATF_chr17_36943954_37061871	NA19075	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	JPT	EAS	AATF	chr17	36943954	37061871
ABCA6_chr17_69073702_69146895	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0075	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19075	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0187	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA9_chr17_68969488_69065927	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0195	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCA9_chr17_68969488_69065927	NA19075	hp2	a0017	a0017c0025	a0017c0025t0002	a0017c0025t0002g0058	JPT	EAS	ABCA9	chr17	68969488	69065927
ABCD1_chrX_153719856_153749755	NA19075	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABCD1	chrX	153719856	153749755
ABCF2_chr7_151206484_151232205	NA19075	hp1	a0001	a0001c0005	a0001c0005t0005	a0001c0005t0005g0044	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF2_chr7_151206484_151232205	NA19075	hp2	a0001	a0001c0001	a0001c0001t0031	a0001c0001t0031g0095	JPT	EAS	ABCF2	chr7	151206484	151232205
ABCF3_chr3_184181199_184199005	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABCF3	chr3	184181199	184199005
ABCF3_chr3_184181199_184199005	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABCF3	chr3	184181199	184199005
ABHD10_chr3_111974026_111998368	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD10_chr3_111974026_111998368	NA19075	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	ABHD10	chr3	111974026	111998368
ABHD13_chr13_108213392_108239243	NA19075	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0038	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD13_chr13_108213392_108239243	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABHD13	chr13	108213392	108239243
ABHD17C_chr15_80690310_80760621	NA19075	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0311	JPT	EAS	ABHD17C	chr15	80690310	80760621
ABHD17C_chr15_80690310_80760621	NA19075	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0275	JPT	EAS	ABHD17C	chr15	80690310	80760621
ABHD18_chr4_127960406_128044953	NA19075	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0043	JPT	EAS	ABHD18	chr4	127960406	128044953
ABHD18_chr4_127960406_128044953	NA19075	hp2	a0002	a0002c0002	a0002c0002t0051	a0002c0002t0051g0294	JPT	EAS	ABHD18	chr4	127960406	128044953
ABITRAM_chr9_108929400_108945954	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABITRAM_chr9_108929400_108945954	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	ABITRAM	chr9	108929400	108945954
ABRAXAS1_chr4_83454517_83490100	NA19075	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0056	JPT	EAS	ABRAXAS1	chr4	83454517	83490100
ABRAXAS1_chr4_83454517_83490100	NA19075	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0001	JPT	EAS	ABRAXAS1	chr4	83454517	83490100
ABRAXAS2_chr10_124796819_124841667	NA19075	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0122	JPT	EAS	ABRAXAS2	chr10	124796819	124841667
ABRAXAS2_chr10_124796819_124841667	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0239	JPT	EAS	ABRAXAS2	chr10	124796819	124841667
ABT1_chr6_26591953_26605739	NA19075	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0001	JPT	EAS	ABT1	chr6	26591953	26605739
ABT1_chr6_26591953_26605739	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	ABT1	chr6	26591953	26605739
ACAA2_chr18_49777164_49818533	NA19075	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0242	JPT	EAS	ACAA2	chr18	49777164	49818533
ACAA2_chr18_49777164_49818533	NA19075	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0130	JPT	EAS	ACAA2	chr18	49777164	49818533
ACAD8_chr11_134248568_134270855	NA19075	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	JPT	EAS	ACAD8	chr11	134248568	134270855
ACAD8_chr11_134248568_134270855	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	JPT	EAS	ACAD8	chr11	134248568	134270855
ACAT1_chr11_108116567_108152603	NA19075	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0233	JPT	EAS	ACAT1	chr11	108116567	108152603
ACAT1_chr11_108116567_108152603	NA19075	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0089	JPT	EAS	ACAT1	chr11	108116567	108152603
ACBD5_chr10_27190214_27245797	NA19075	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0053	JPT	EAS	ACBD5	chr10	27190214	27245797