Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1CF_chr10_50794409_50890627	NA19081	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0059	JPT	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0148	JPT	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	NA19081	hp1	a0007	a0007c0034	a0007c0034t0001	a0007c0034t0001g0357	JPT	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	NA19081	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0146	JPT	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	NA19081	hp1	a0006	a0006c0008	a0006c0008t0001	a0006c0008t0001g0229	JPT	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0153	JPT	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	NA19081	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0115	JPT	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	NA19081	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0011	JPT	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	NA19081	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0129	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	NA19081	hp2	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0060	JPT	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	NA19081	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	JPT	EAS	A4GNT	chr3	138118713	138137390
AACS_chr12_125060435_125148316	NA19081	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0180	JPT	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0343	JPT	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	NA19081	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0035	JPT	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0070	JPT	EAS	AADACL2	chr3	151728927	151766339
AADAC_chr3_151809116_151833488	NA19081	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0098	JPT	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	NA19081	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0002	JPT	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	NA19081	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0301	JPT	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0302	JPT	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	NA19081	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0029	JPT	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0098	JPT	EAS	AAMDC	chr11	77816144	77877352
AANAT_chr17_76462603_76475117	NA19081	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	NA19081	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	JPT	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	NA19081	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0010	JPT	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	NA19081	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0002	JPT	EAS	AARD	chr8	116933207	116949487
AARSD1_chr17_42945526_42969454	NA19081	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0066	JPT	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0125	JPT	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	NA19081	hp1	a0001	a0001c0001	a0001c0001t0014	a0001c0001t0014g0003	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	JPT	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	NA19081	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0312	JPT	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	NA19081	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0008	JPT	EAS	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	NA19081	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0181	JPT	EAS	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	NA19081	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0021	JPT	EAS	AASS	chr7	122068549	122149249
ABAT_chr16_8669617_8789570	NA19081	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0253	JPT	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	NA19081	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0213	JPT	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	NA19081	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0307	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	NA19081	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0037	JPT	EAS	ABCA10	chr17	69143007	69233824
ABCA1_chr9_104776006_104933155	NA19081	hp1	a0003	a0003c0002	a0003c0002t0007	a0003c0002t0007g0059	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	NA19081	hp2	a0007	a0007c0003	a0007c0003t0004	a0007c0003t0004g0170	JPT	EAS	ABCA1	chr9	104776006	104933155
ABCA4_chr1_93987834_94126148	NA19081	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0281	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA4_chr1_93987834_94126148	NA19081	hp2	a0008	a0008c0014	a0008c0014t0001	a0008c0014t0001g0161	JPT	EAS	ABCA4	chr1	93987834	94126148
ABCA5_chr17_69239311_69332133	NA19081	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0122	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	NA19081	hp2	a0002	a0002c0001	a0002c0001t0002	a0002c0001t0002g0242	JPT	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	NA19081	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0120	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	NA19081	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0178	JPT	EAS	ABCA6	chr17	69073702	69146895
ABCA8_chr17_68862289_68960392	NA19081	hp1	a0001	a0001c0017	a0001c0017t0001	a0001c0017t0001g0024	JPT	EAS	ABCA8	chr17	68862289	68960392
ABCA8_chr17_68862289_68960392	NA19081	hp2	a0002	a0002c0006	a0002c0006t0001	a0002c0006t0001g0201	JPT	EAS	ABCA8	chr17	68862289	68960392