Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	A1BG	chr19	58340183	58358492
A2M_chr12_9062708_9120919	HG02056	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0051	KHV	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0149	KHV	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02056	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0194	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02056	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0016	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02056	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0191	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02056	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0216	KHV	EAS	A4GALT	chr22	42687121	42725870
AADACL2_chr3_151728927_151766339	HG02056	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0016	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02056	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0010	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0142	KHV	EAS	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0029	KHV	EAS	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG02056	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02056	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	KHV	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0086	KHV	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0158	KHV	EAS	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02056	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0085	KHV	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0353	KHV	EAS	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG02056	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0124	KHV	EAS	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG02056	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0046	KHV	EAS	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0104	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0155	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0025	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0041	KHV	EAS	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0050	KHV	EAS	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	KHV	EAS	AARD	chr8	116933207	116949487
AARSD1_chr17_42945526_42969454	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0018	KHV	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02056	hp2	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0144	KHV	EAS	AARSD1	chr17	42945526	42969454
AASDH_chr4_56333290_56392491	HG02056	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0313	KHV	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02056	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0272	KHV	EAS	AASDH	chr4	56333290	56392491
ABCA1_chr9_104776006_104933155	HG02056	hp1	a0007	a0007c0003	a0007c0003t0009	a0007c0003t0009g0156	KHV	EAS	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02056	hp2	a0014	a0014c0053	a0014c0053t0002	a0014c0053t0002g0146	KHV	EAS	ABCA1	chr9	104776006	104933155
ABCA2_chr9_137002234_137033237	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	KHV	EAS	ABCA2	chr9	137002234	137033237
ABCA2_chr9_137002234_137033237	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	KHV	EAS	ABCA2	chr9	137002234	137033237
ABCA3_chr16_2270881_2345728	HG02056	hp1	a0001	a0001c0002	a0001c0002t0003	a0001c0002t0003g0022	KHV	EAS	ABCA3	chr16	2270881	2345728
ABCA3_chr16_2270881_2345728	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0073	KHV	EAS	ABCA3	chr16	2270881	2345728
ABCB11_chr2_168915781_169036324	HG02056	hp1	a0001	a0001c0001	a0001c0001t0013	a0001c0001t0013g0122	KHV	EAS	ABCB11	chr2	168915781	169036324
ABCB11_chr2_168915781_169036324	HG02056	hp2	a0002	a0002c0004	a0002c0004t0002	a0002c0004t0002g0031	KHV	EAS	ABCB11	chr2	168915781	169036324
ABCB1_chr7_87498017_87605884	HG02056	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0137	KHV	EAS	ABCB1	chr7	87498017	87605884
ABCB1_chr7_87498017_87605884	HG02056	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0190	KHV	EAS	ABCB1	chr7	87498017	87605884
ABCB5_chr7_20610667_20762008	HG02056	hp1	a0015	a0015c0040	a0015c0040t0001	a0015c0040t0001g0169	KHV	EAS	ABCB5	chr7	20610667	20762008
ABCB5_chr7_20610667_20762008	HG02056	hp2	a0008	a0008c0009	a0008c0009t0001	a0008c0009t0001g0221	KHV	EAS	ABCB5	chr7	20610667	20762008
ABCB7_chrX_75046048_75161283	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	KHV	EAS	ABCB7	chrX	75046048	75161283
ABCB8_chr7_151023450_151052782	HG02056	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	KHV	EAS	ABCB8	chr7	151023450	151052782