JoGo: Joint Open Genome and Omics Platform

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	KHV	EAS	A1BG	chr19	58340183	58358492
A2ML1_chr12_8817621_8881787	HG02071	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0332	KHV	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0135	KHV	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0206	KHV	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0250	KHV	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02071	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0042	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02071	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0005	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GNT_chr3_138118713_138137390	HG02071	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0026	KHV	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0129	KHV	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0090	KHV	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02071	hp1	a0001	a0001c0003	a0001c0003t0001	a0001c0003t0001g0256	KHV	EAS	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02071	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0156	KHV	EAS	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02071	hp1	a0001	a0001c0001	a0001c0001t0048	a0001c0001t0048g0060	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02071	hp2	a0002	a0002c0002	a0002c0002t0004	a0002c0002t0004g0014	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02071	hp1	a0006	a0006c0015	a0006c0015t0011	a0006c0015t0011g0115	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02071	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0101	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	KHV	EAS	AADAC	chr3	151809116	151833488
AAGAB_chr15_67195667_67259661	HG02071	hp1	a0002	a0002c0002	a0002c0002t0003	a0002c0002t0003g0180	KHV	EAS	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0308	KHV	EAS	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG02071	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0065	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0291	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02071	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0005	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0128	KHV	EAS	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG02071	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0249	KHV	EAS	AARS1	chr16	70247298	70294506
AARSD1_chr17_42945526_42969454	HG02071	hp1	a0003	a0003c0003	a0003c0003t0001	a0003c0003t0001g0037	KHV	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02071	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	KHV	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02071	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0118	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02071	hp2	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AATK_chr17_81112295_81171221	HG02071	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0101	KHV	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02071	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0304	KHV	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02071	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0052	KHV	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02071	hp2	a0002	a0002c0004	a0002c0004t0004	a0002c0004t0004g0115	KHV	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02071	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0203	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02071	hp2	a0004	a0004c0004	a0004c0004t0003	a0004c0004t0003g0304	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02071	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0156	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02071	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0130	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG02071	hp1	a0019	a0019c0030	a0019c0030t0003	a0019c0030t0003g0068	KHV	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG02071	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0131	KHV	EAS	ABCA13	chr7	48166458	48652497
ABCA5_chr17_69239311_69332133	HG02071	hp1	a0002	a0002c0016	a0002c0016t0004	a0002c0016t0004g0180	KHV	EAS	ABCA5	chr17	69239311	69332133
ABCA5_chr17_69239311_69332133	HG02071	hp2	a0003	a0003c0003	a0003c0003t0003	a0003c0003t0003g0043	KHV	EAS	ABCA5	chr17	69239311	69332133
ABCA6_chr17_69073702_69146895	HG02071	hp1	a0005	a0005c0005	a0005c0005t0002	a0005c0005t0002g0128	KHV	EAS	ABCA6	chr17	69073702	69146895
ABCA6_chr17_69073702_69146895	HG02071	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0198	KHV	EAS	ABCA6	chr17	69073702	69146895