Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0055	KHV	EAS	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02523	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0003	KHV	EAS	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02523	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0033	KHV	EAS	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	KHV	EAS	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG02523	hp1	a0002	a0002c0004	a0002c0004t0003	a0002c0004t0003g0150	KHV	EAS	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG02523	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0295	KHV	EAS	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG02523	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0101	KHV	EAS	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0200	KHV	EAS	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG02523	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0230	KHV	EAS	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02523	hp2	a0008	a0008c0009	a0008c0009t0000	a0008c0009t0000g0196	KHV	EAS	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02523	hp1	a0001	a0001c0002	a0001c0002t0005	a0001c0002t0005g0239	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02523	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0141	KHV	EAS	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02523	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0001	KHV	EAS	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0119	KHV	EAS	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	KHV	EAS	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	KHV	EAS	AAAS	chr12	53302460	53326610
AADACL2_chr3_151728927_151766339	HG02523	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0002	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02523	hp2	a0007	a0007c0009	a0007c0009t0001	a0007c0009t0001g0118	KHV	EAS	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02523	hp1	a0002	a0002c0003	a0002c0003t0003	a0002c0003t0003g0004	KHV	EAS	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0028	KHV	EAS	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02523	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	KHV	EAS	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02523	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0004	KHV	EAS	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0141	KHV	EAS	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	KHV	EAS	AADAT	chr4	170055222	170094956
AAMDC_chr11_77816144_77877352	HG02523	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0046	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0008	KHV	EAS	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	KHV	EAS	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG02523	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0003	KHV	EAS	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02523	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0006	KHV	EAS	AARD	chr8	116933207	116949487
AARS2_chr6_44293731_44318347	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG02523	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0004	KHV	EAS	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	KHV	EAS	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	KHV	EAS	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG02523	hp1	a0001	a0001c0001	a0001c0001t0003	a0001c0001t0003g0003	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02523	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	KHV	EAS	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0093	KHV	EAS	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02523	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0145	KHV	EAS	AASDH	chr4	56333290	56392491
AATK_chr17_81112295_81171221	HG02523	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0150	KHV	EAS	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02523	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0081	KHV	EAS	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02523	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0114	KHV	EAS	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02523	hp2	a0002	a0002c0005	a0002c0005t0003	a0002c0005t0003g0075	KHV	EAS	ABAT	chr16	8669617	8789570
ABCA10_chr17_69143007_69233824	HG02523	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0066	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA10_chr17_69143007_69233824	HG02523	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0166	KHV	EAS	ABCA10	chr17	69143007	69233824
ABCA12_chr2_214926542_215143626	HG02523	hp1	a0001	a0001c0001	a0001c0001t0020	a0001c0001t0020g0155	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02523	hp2	a0001	a0001c0006	a0001c0006t0002	a0001c0006t0002g0116	KHV	EAS	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG02523	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0065	KHV	EAS	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG02523	hp2	a0020	a0020c0034	a0020c0034t0003	a0020c0034t0003g0117	KHV	EAS	ABCA13	chr7	48166458	48652497