Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PLCG2 164 38 42 32 0 0 0.636 0.147 0.163 0.124 0.000 0.000 chr16 81774291 81967685
view PLCH1 131 33 92 54 0 0 0.508 0.128 0.357 0.209 0.000 0.000 chr3 155474881 155750071
view PLCH2 191 60 53 35 0 0 0.740 0.233 0.205 0.136 0.000 0.000 chr1 2471289 2510532
view PLCL1 102 33 107 56 0 0 0.395 0.128 0.415 0.217 0.000 0.000 chr2 197799593 198154863
view PLCL2 124 25 92 58 0 0 0.481 0.097 0.357 0.225 0.000 0.000 chr3 16879955 17095604
view PLCXD1 148 51 81 37 0 0 0.574 0.198 0.314 0.143 0.000 0.000 chrX 276381 308356
view PLCXD2 161 50 67 37 0 0 0.624 0.194 0.260 0.143 0.000 0.000 chr3 111669676 111732007
view PLCXD3 121 35 78 47 0 0 0.469 0.136 0.302 0.182 0.000 0.000 chr5 41301952 41515601
view PLCZ1 162 53 75 41 0 0 0.628 0.205 0.291 0.159 0.000 0.000 chr12 18678180 18743012
view PLD1 146 42 71 47 0 0 0.566 0.163 0.275 0.182 0.000 0.000 chr3 171595404 171815483
view PLD2 224 78 31 24 0 0 0.868 0.302 0.120 0.093 0.000 0.000 chr17 4802152 4828430
view PLD3 181 51 52 34 0 0 0.702 0.198 0.202 0.132 0.000 0.000 chr19 40343695 40383485
view PLD4 212 75 45 29 0 0 0.822 0.291 0.174 0.112 0.000 0.000 chr14 104919879 104938236
view PLD5 93 17 72 47 0 0 0.360 0.066 0.279 0.182 0.000 0.000 chr1 242077986 242529697
view PLD6 217 72 36 29 0 0 0.841 0.279 0.140 0.112 0.000 0.000 chr17 17195995 17211333
view PLEC 178 46 64 43 0 0 0.690 0.178 0.248 0.167 0.000 0.000 chr8 143910153 143944597
view PLEC 150 32 75 49 0 0 0.581 0.124 0.291 0.190 0.000 0.000 chr8 143910153 143978529
view PLEK2 176 59 73 41 0 0 0.682 0.229 0.283 0.159 0.000 0.000 chr14 67381984 67417165
view PLEKHA1 178 60 70 38 0 0 0.690 0.233 0.271 0.147 0.000 0.000 chr10 122369708 122437345
view PLEKHA2 187 58 47 30 0 0 0.725 0.225 0.182 0.116 0.000 0.000 chr8 38896346 38978912
view PLEKHA3 190 65 59 35 0 0 0.736 0.252 0.229 0.136 0.000 0.000 chr2 178475457 178521463
view PLEKHA4 149 34 77 46 0 0 0.578 0.132 0.298 0.178 0.000 0.000 chr19 48832097 48873617
view PLEKHA5 157 52 76 44 0 0 0.609 0.202 0.295 0.171 0.000 0.000 chr12 19124733 19381400
view PLEKHA6 134 28 83 58 0 0 0.519 0.109 0.322 0.225 0.000 0.000 chr1 204213853 204364929
view PLEKHA7 121 25 68 49 0 0 0.469 0.097 0.264 0.190 0.000 0.000 chr11 16772297 17019414
view PLEKHA8 116 36 115 57 0 0 0.450 0.140 0.446 0.221 0.000 0.000 chr7 30023412 30089650
view PLEKHB1 207 69 44 31 0 0 0.802 0.267 0.171 0.120 0.000 0.000 chr11 73641581 73667819
view PLEKHB2 131 20 106 70 0 0 0.508 0.078 0.411 0.271 0.000 0.000 chr2 131100336 131154845
view PLEKHD1 158 41 77 48 0 0 0.612 0.159 0.298 0.186 0.000 0.000 chr14 69479728 69536551
view PLEKHF1 219 76 34 24 0 0 0.849 0.295 0.132 0.093 0.000 0.000 chr19 29660461 29680477
view PLEKHF2 191 55 57 41 0 0 0.740 0.213 0.221 0.159 0.000 0.000 chr8 95128785 95161685
view PLEKHG1 135 35 60 39 0 0 0.523 0.136 0.233 0.151 0.000 0.000 chr6 150594885 150848665
view PLEKHG2 206 70 47 30 0 0 0.798 0.271 0.182 0.116 0.000 0.000 chr19 39407669 39433415
view PLEKHG3 123 19 113 70 0 0 0.477 0.074 0.438 0.271 0.000 0.000 chr14 64699424 64755249
view PLEKHG4B 104 18 91 51 0 0 0.403 0.070 0.353 0.198 0.000 0.000 chr5 87168 194966
view PLEKHG4 160 36 87 59 0 0 0.620 0.140 0.337 0.229 0.000 0.000 chr16 67274532 67294480
view PLEKHG5 143 33 94 55 0 0 0.554 0.128 0.364 0.213 0.000 0.000 chr1 6462122 6496667
view PLEKHG6 223 77 29 22 0 0 0.864 0.298 0.112 0.085 0.000 0.000 chr12 6305682 6333506
view PLEKHG7 125 12 113 83 0 0 0.484 0.047 0.438 0.322 0.000 0.000 chr12 92697989 92777455
view PLEKHH1 206 64 40 33 0 0 0.798 0.248 0.155 0.128 0.000 0.000 chr14 67528290 67594612
view PLEKHH2 127 17 98 67 0 0 0.492 0.066 0.380 0.260 0.000 0.000 chr2 43632260 43772987
view PLEKHH3 180 53 74 48 0 0 0.698 0.205 0.287 0.186 0.000 0.000 chr17 42662914 42681994
view PLEKHJ1 212 71 41 30 1 1 0.822 0.275 0.159 0.116 0.004 0.004 chr19 2228153 2241329
view PLEKHM1 162 48 75 44 0 0 0.628 0.186 0.291 0.171 0.000 0.000 chr17 45430900 45495721
view PLEKHM2 167 43 67 46 0 0 0.647 0.167 0.260 0.178 0.000 0.000 chr1 15679320 15739769
view PLEKHM3 99 15 93 62 0 0 0.384 0.058 0.360 0.240 0.000 0.000 chr2 207816288 208030527
view PLEKHN1 210 63 39 34 0 0 0.814 0.244 0.151 0.132 0.000 0.000 chr1 961482 980865
view PLEKHO1 212 77 44 26 0 0 0.822 0.298 0.171 0.101 0.000 0.000 chr1 150144916 150165065
view PLEKHO2 160 39 84 55 0 0 0.620 0.151 0.326 0.213 0.000 0.000 chr15 64836915 64873002
view PLEKHS1 200 72 47 26 0 0 0.775 0.279 0.182 0.101 0.000 0.000 chr10 113746682 113788429