Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PLXNA3 69 11 169 79 0 0 0.267 0.043 0.655 0.306 0.000 0.000 chrX 154453281 154482779
view PLXNA4 43 2 93 33 0 0 0.167 0.008 0.360 0.128 0.000 0.000 chr7 132118340 132581470
view PLXNB1 158 50 92 52 0 0 0.612 0.194 0.357 0.202 0.000 0.000 chr3 48398854 48435086
view PLXNB2 150 35 70 39 0 0 0.581 0.136 0.271 0.151 0.000 0.000 chr22 50269979 50312646
view PLXNB3 92 23 157 73 0 0 0.357 0.089 0.609 0.283 0.000 0.000 chrX 153759249 153784341
view PLXNC1 148 38 63 37 0 0 0.574 0.147 0.244 0.143 0.000 0.000 chr12 94143577 94312675
view PLXND1 207 73 36 21 0 0 0.802 0.283 0.140 0.081 0.000 0.000 chr3 129550214 129611676
view PM20D1 207 69 40 27 0 0 0.802 0.267 0.155 0.105 0.000 0.000 chr1 205823025 205855132
view PM20D2 185 59 60 37 0 0 0.717 0.229 0.233 0.143 0.000 0.000 chr6 89141055 89170565
view PMAIP1 228 85 27 18 2 1 0.884 0.329 0.105 0.070 0.008 0.004 chr18 59894996 59909305
view PMCH 201 72 57 33 0 0 0.779 0.279 0.221 0.128 0.000 0.000 chr12 102191459 102202833
view PMEL 197 59 58 44 0 0 0.764 0.229 0.225 0.171 0.000 0.000 chr12 55949105 55971042
view PMEPA1 179 48 44 30 0 0 0.694 0.186 0.171 0.116 0.000 0.000 chr20 57643396 57715015
view PMF1 181 58 60 32 0 0 0.702 0.225 0.233 0.124 0.000 0.000 chr1 156208007 156245042
view PMFBP1 171 60 69 38 0 0 0.663 0.233 0.267 0.147 0.000 0.000 chr16 72114097 72177155
view PMIS2 221 77 34 25 1 1 0.857 0.298 0.132 0.097 0.004 0.004 chr19 35581173 35592296
view PML 170 54 75 46 0 0 0.659 0.209 0.291 0.178 0.000 0.000 chr15 73989716 74052827
view PMM1 164 46 84 52 0 0 0.636 0.178 0.326 0.202 0.000 0.000 chr22 41571900 41594840
view PMM2 203 67 49 34 0 0 0.787 0.260 0.190 0.132 0.000 0.000 chr16 8792839 8854325
view PMP22 212 72 35 27 0 0 0.822 0.279 0.136 0.105 0.000 0.000 chr17 15224779 15270326
view PMP2 213 81 45 24 0 0 0.826 0.314 0.174 0.093 0.000 0.000 chr8 81435326 81452439
view PMPCA 194 57 59 44 1 1 0.752 0.221 0.229 0.171 0.004 0.004 chr9 136405658 136428761
view PMPCB 217 80 40 24 0 0 0.841 0.310 0.155 0.093 0.000 0.000 chr7 103292435 103319686
view PMS1 116 26 105 57 0 0 0.450 0.101 0.407 0.221 0.000 0.000 chr2 189779450 189882629
view PMS2 203 69 43 28 0 0 0.787 0.267 0.167 0.109 0.000 0.000 chr7 5965925 6014049
view PMVK 146 29 106 72 0 0 0.566 0.112 0.411 0.279 0.000 0.000 chr1 154919740 154941719
view PNCK 76 17 176 82 0 0 0.295 0.066 0.682 0.318 0.000 0.000 chrX 153664733 153678813
view PNISR 202 70 50 33 0 0 0.783 0.271 0.194 0.128 0.000 0.000 chr6 99393050 99430308
view PNKD 139 35 93 57 0 0 0.539 0.136 0.360 0.221 0.000 0.000 chr2 218265519 218351793
view PNKP 214 75 38 24 0 0 0.829 0.291 0.147 0.093 0.000 0.000 chr19 49856204 49872576
view PNLDC1 199 63 49 35 0 0 0.771 0.244 0.190 0.136 0.000 0.000 chr6 159795276 159825704
view PNLIPRP1 209 75 43 25 0 0 0.810 0.291 0.167 0.097 0.000 0.000 chr10 116585959 116614175
view PNLIPRP3 143 47 82 39 0 0 0.554 0.182 0.318 0.151 0.000 0.000 chr10 116422847 116482957
view PNLIP 137 49 109 51 0 0 0.531 0.190 0.422 0.198 0.000 0.000 chr10 116540931 116572855
view PNMA1 206 69 49 33 0 0 0.798 0.267 0.190 0.128 0.000 0.000 chr14 73706783 73719384
view PNMA2 207 72 48 32 0 0 0.802 0.279 0.186 0.124 0.000 0.000 chr8 26499701 26518872
view PNMA3 101 29 150 71 0 0 0.391 0.112 0.581 0.275 0.000 0.000 chrX 153051470 153065462
view PNMA5 84 25 154 67 0 0 0.326 0.097 0.597 0.260 0.000 0.000 chrX 152983824 152999116
view PNMA6A 14 1 134 50 0 0 0.054 0.004 0.519 0.194 0.000 0.000 chrX 153067454 153080019
view PNMA6E 112 36 137 60 1 1 0.434 0.140 0.531 0.233 0.004 0.004 chrX 153390639 153406350
view PNMA6F 103 33 153 70 0 0 0.399 0.128 0.593 0.271 0.000 0.000 chrX 153312680 153326767
view PNMA8A 226 80 29 22 0 0 0.876 0.310 0.112 0.085 0.000 0.000 chr19 46461503 46476563
view PNMA8B 212 79 42 23 1 0 0.822 0.306 0.163 0.089 0.004 0.000 chr19 46486191 46500867
view PNMA8C 220 76 36 27 1 1 0.853 0.295 0.140 0.105 0.004 0.004 chr19 46419697 46433936
view PNMT 187 59 67 42 0 0 0.725 0.229 0.260 0.163 0.000 0.000 chr17 39663453 39675475
view PNN 221 79 37 26 0 0 0.857 0.306 0.143 0.101 0.000 0.000 chr14 39170254 39188220
view PNO1 221 79 32 22 0 0 0.857 0.306 0.124 0.085 0.000 0.000 chr2 68152888 68181238
view PNOC 211 79 35 20 0 0 0.818 0.306 0.136 0.078 0.000 0.000 chr8 28312268 28348351
view PNPLA1 192 57 51 35 0 0 0.744 0.221 0.198 0.136 0.000 0.000 chr6 36265060 36318955
view PNPLA2 220 77 31 23 2 0 0.853 0.298 0.120 0.089 0.008 0.000 chr11 813914 830573