Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view PLEK 186 55 64 43 0 0 0.721 0.213 0.248 0.167 0.000 0.000 chr2 68360282 68402453
view PLET1 183 54 72 49 0 0 0.709 0.209 0.279 0.190 0.000 0.000 chr11 112243153 112265860
view PLGLB1 174 74 72 26 1 1 0.674 0.287 0.279 0.101 0.004 0.004 chr2 87005224 87026844
view PLGLB2 156 46 73 50 22 2 0.605 0.178 0.283 0.194 0.085 0.008 chr2 87743087 87764476
view PLGRKT 206 76 37 22 0 0 0.798 0.295 0.143 0.085 0.000 0.000 chr9 5352971 5442925
view PLG 191 65 54 31 0 0 0.740 0.252 0.209 0.120 0.000 0.000 chr6 160697244 160759097
view PLIN1 229 82 27 21 1 1 0.888 0.318 0.105 0.081 0.004 0.004 chr15 89659367 89684367
view PLIN2 223 84 33 20 0 0 0.864 0.326 0.128 0.078 0.000 0.000 chr9 19110761 19132492
view PLIN3 222 77 27 20 0 0 0.860 0.298 0.105 0.078 0.000 0.000 chr19 4833341 4872667
view PLIN4 205 61 42 33 0 0 0.795 0.236 0.163 0.128 0.000 0.000 chr19 4497192 4523486
view PLIN5 205 60 49 42 0 0 0.795 0.233 0.190 0.163 0.000 0.000 chr19 4517531 4540224
view PLK1 176 62 73 37 0 0 0.682 0.240 0.283 0.143 0.000 0.000 chr16 23673889 23695367
view PLK2 194 59 61 43 0 0 0.752 0.229 0.236 0.167 0.000 0.000 chr5 58448982 58465086
view PLK3 191 63 47 29 1 1 0.740 0.244 0.182 0.112 0.004 0.004 chr1 44795377 44810990
view PLK4 181 70 69 31 1 0 0.702 0.271 0.267 0.120 0.004 0.000 chr4 127875893 127904224
view PLK5 214 72 35 26 1 0 0.829 0.279 0.136 0.101 0.004 0.000 chr19 1519077 1541046
view PLLP 184 53 63 44 0 0 0.713 0.205 0.244 0.171 0.000 0.000 chr16 57251097 57289672
view PLN 191 56 66 48 0 0 0.740 0.217 0.256 0.186 0.000 0.000 chr6 118543296 118566716
view PLOD1 189 63 53 31 0 0 0.733 0.244 0.205 0.120 0.000 0.000 chr1 11929717 11980537
view PLOD2 182 65 72 38 0 0 0.705 0.252 0.279 0.147 0.000 0.000 chr3 146064440 146166184
view PLOD3 213 72 41 29 0 0 0.826 0.279 0.159 0.112 0.000 0.000 chr7 101200984 101222581
view PLP1 95 29 160 73 0 0 0.368 0.112 0.620 0.283 0.000 0.000 chrX 103771840 103797619
view PLP2 66 7 182 88 0 0 0.256 0.027 0.705 0.341 0.000 0.000 chrX 49166898 49180235
view PLPBP 173 50 77 49 0 0 0.671 0.194 0.298 0.190 0.000 0.000 chr8 37757645 37784768
view PLPP1 146 52 87 43 0 0 0.566 0.202 0.337 0.167 0.000 0.000 chr5 55419854 55539964
view PLPP2 176 43 63 44 0 0 0.682 0.167 0.244 0.171 0.000 0.000 chr19 276043 296403
view PLPP3 167 46 55 35 0 0 0.647 0.178 0.213 0.136 0.000 0.000 chr1 56489761 56584563
view PLPP4 163 59 48 26 0 0 0.632 0.229 0.186 0.101 0.000 0.000 chr10 120452227 120597065
view PLPP5 161 56 95 47 0 0 0.624 0.217 0.368 0.182 0.000 0.000 chr8 38258130 38274224
view PLPP6 238 91 20 14 0 0 0.922 0.353 0.078 0.054 0.000 0.000 chr9 4657294 4670258
view PLPP7 221 77 32 24 0 0 0.857 0.298 0.124 0.093 0.000 0.000 chr9 131284723 131314261
view PLPPR1 101 19 80 50 0 0 0.391 0.074 0.310 0.194 0.000 0.000 chr9 101023727 101330135
view PLPPR2 196 63 59 39 0 0 0.760 0.244 0.229 0.151 0.000 0.000 chr19 11350432 11370698
view PLPPR3 198 59 51 38 0 0 0.767 0.229 0.198 0.147 0.000 0.000 chr19 807488 826955
view PLPPR4 191 69 54 30 0 0 0.740 0.267 0.209 0.116 0.000 0.000 chr1 99259492 99314584
view PLPPR5 139 34 84 49 0 0 0.539 0.132 0.326 0.190 0.000 0.000 chr1 98885245 99009861
view PLRG1 214 77 36 23 0 0 0.829 0.298 0.140 0.089 0.000 0.000 chr4 154530005 154555400
view PLS1 137 39 89 45 0 0 0.531 0.151 0.345 0.174 0.000 0.000 chr3 142591393 142718664
view PLS3 63 10 181 86 0 0 0.244 0.039 0.702 0.333 0.000 0.000 chrX 115556174 115655861
view PLSCR1 170 47 75 47 0 0 0.659 0.182 0.291 0.182 0.000 0.000 chr3 146510180 146549607
view PLSCR2 181 71 59 26 0 0 0.702 0.275 0.229 0.101 0.000 0.000 chr3 146428288 146474561
view PLSCR3 226 81 29 21 0 0 0.876 0.314 0.112 0.081 0.000 0.000 chr17 7384727 7399525
view PLSCR4 189 62 51 33 0 0 0.733 0.240 0.198 0.128 0.000 0.000 chr3 146187335 146256105
view PLSCR5 207 77 45 23 0 0 0.802 0.298 0.174 0.089 0.000 0.000 chr3 146580837 146610346
view PLTP 215 80 41 23 0 0 0.833 0.310 0.159 0.089 0.000 0.000 chr20 45893622 45917155
view PLVAP 217 71 34 29 0 0 0.841 0.275 0.132 0.112 0.000 0.000 chr19 17346455 17382342
view PLXDC1 159 48 68 37 0 0 0.616 0.186 0.264 0.143 0.000 0.000 chr17 39058313 39156637
view PLXDC2 89 14 98 57 0 0 0.345 0.054 0.380 0.221 0.000 0.000 chr10 19811432 20294856
view PLXNA1 172 57 70 37 0 0 0.667 0.221 0.271 0.143 0.000 0.000 chr3 126978115 127042389
view PLXNA2 155 48 56 35 0 0 0.601 0.186 0.217 0.136 0.000 0.000 chr1 208017242 208249384