Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SLC18A2 177 55 60 38 0 0 0.686 0.213 0.233 0.147 0.000 0.000 chr10 117236114 117284430
view SLC18A3 220 83 33 18 2 1 0.853 0.322 0.128 0.070 0.008 0.004 chr10 49605310 49617720
view SLC18B1 151 37 96 60 0 0 0.585 0.143 0.372 0.233 0.000 0.000 chr6 132764370 132803637
view SLC19A1 158 44 76 42 0 0 0.612 0.171 0.295 0.163 0.000 0.000 chr21 45507565 45547440
view SLC19A2 192 59 56 40 0 0 0.744 0.229 0.217 0.155 0.000 0.000 chr1 169458909 169490944
view SLC19A3 195 57 40 30 0 0 0.756 0.221 0.155 0.116 0.000 0.000 chr2 227678763 227723028
view SLC1A1 191 60 38 29 0 0 0.740 0.233 0.147 0.112 0.000 0.000 chr9 4485468 4592469
view SLC1A2 152 54 60 29 0 0 0.589 0.209 0.233 0.112 0.000 0.000 chr11 35246205 35424558
view SLC1A3 189 62 45 27 0 0 0.733 0.240 0.174 0.105 0.000 0.000 chr5 36601606 36693334
view SLC1A4 196 64 35 22 0 0 0.760 0.248 0.136 0.085 0.000 0.000 chr2 64984399 65028865
view SLC1A5 213 74 38 26 0 0 0.826 0.287 0.147 0.101 0.000 0.000 chr19 46769883 46793594
view SLC1A6 203 67 42 28 1 1 0.787 0.260 0.163 0.109 0.004 0.004 chr19 14945033 14984864
view SLC1A7 199 69 46 29 0 0 0.771 0.267 0.178 0.112 0.000 0.000 chr1 53082183 53147638
view SLC20A1 166 48 86 52 0 0 0.643 0.186 0.333 0.202 0.000 0.000 chr2 112640939 112668825
view SLC20A2 118 26 101 57 0 0 0.457 0.101 0.391 0.221 0.000 0.000 chr8 42411475 42506231
view SLC22A10 200 74 52 28 0 0 0.775 0.287 0.202 0.109 0.000 0.000 chr11 63284903 63316783
view SLC22A11 191 62 55 34 0 0 0.740 0.240 0.213 0.132 0.000 0.000 chr11 64550941 64577875
view SLC22A12 194 67 58 33 0 0 0.752 0.260 0.225 0.128 0.000 0.000 chr11 64586220 64607344
view SLC22A13 174 52 72 43 0 0 0.674 0.202 0.279 0.167 0.000 0.000 chr3 38260812 38283757
view SLC22A14 202 72 40 22 0 0 0.783 0.279 0.155 0.085 0.000 0.000 chr3 38277294 38323575
view SLC22A15 153 48 82 46 0 0 0.593 0.186 0.318 0.178 0.000 0.000 chr1 115971513 116075054
view SLC22A16 207 72 35 22 0 0 0.802 0.279 0.136 0.085 0.000 0.000 chr6 110419687 110481613
view SLC22A17 219 76 37 27 0 0 0.849 0.295 0.143 0.105 0.000 0.000 chr14 23341318 23357887
view SLC22A18 202 58 46 39 0 0 0.783 0.225 0.178 0.151 0.000 0.000 chr11 2897278 2930246
view SLC22A1 207 75 41 22 0 0 0.802 0.291 0.159 0.085 0.000 0.000 chr6 160116815 160163718
view SLC22A23 110 20 78 46 0 0 0.426 0.078 0.302 0.178 0.000 0.000 chr6 3263973 3462050
view SLC22A24 182 63 60 32 0 0 0.705 0.244 0.233 0.124 0.000 0.000 chr11 63074940 63149221
view SLC22A25 171 55 72 41 0 0 0.663 0.213 0.279 0.159 0.000 0.000 chr11 63153437 63248599
view SLC22A2 154 43 84 53 0 0 0.597 0.167 0.326 0.205 0.000 0.000 chr6 160211755 160263821
view SLC22A31 213 69 41 32 0 0 0.826 0.267 0.159 0.124 0.000 0.000 chr16 89190761 89205537
view SLC22A3 158 44 65 40 0 0 0.612 0.171 0.252 0.155 0.000 0.000 chr6 160343378 160457577
view SLC22A4 196 70 58 35 0 0 0.760 0.271 0.225 0.136 0.000 0.000 chr5 132289394 132349190
view SLC22A5 206 75 47 28 0 0 0.798 0.291 0.182 0.109 0.000 0.000 chr5 132364710 132400612
view SLC22A6 214 81 40 21 1 0 0.829 0.314 0.155 0.081 0.004 0.000 chr11 62971597 62989967
view SLC22A7 201 68 53 33 0 0 0.779 0.264 0.205 0.128 0.000 0.000 chr6 43293260 43310538
view SLC22A8 215 77 33 19 0 0 0.833 0.298 0.128 0.074 0.000 0.000 chr11 62987824 63020841
view SLC22A9 172 45 64 42 0 0 0.667 0.174 0.248 0.163 0.000 0.000 chr11 63364785 63415294
view SLC23A1 174 56 79 44 0 0 0.674 0.217 0.306 0.171 0.000 0.000 chr5 139362196 139388297
view SLC23A2 101 15 82 49 0 0 0.391 0.058 0.318 0.190 0.000 0.000 chr20 4847358 5006510
view SLC23A3 216 81 40 23 0 0 0.837 0.314 0.155 0.089 0.000 0.000 chr2 219156465 219175029
view SLC24A1 161 53 90 47 0 0 0.624 0.205 0.349 0.182 0.000 0.000 chr15 65616938 65661260
view SLC24A2 93 14 75 44 0 0 0.360 0.054 0.291 0.171 0.000 0.000 chr9 19502455 19794037
view SLC24A3 80 6 76 44 0 0 0.310 0.023 0.295 0.171 0.000 0.000 chr20 19207642 19727926
view SLC24A4 140 20 66 50 0 0 0.543 0.078 0.256 0.194 0.000 0.000 chr14 92318165 92506481
view SLC24A5 171 70 81 30 0 0 0.663 0.271 0.314 0.116 0.000 0.000 chr15 48115990 48147672
view SLC25A10 206 66 47 34 0 0 0.798 0.256 0.182 0.132 0.000 0.000 chr17 81707284 81726012
view SLC25A11 216 79 39 24 1 0 0.837 0.306 0.151 0.093 0.004 0.000 chr17 4932130 4945046
view SLC25A12 156 55 86 42 0 0 0.605 0.213 0.333 0.163 0.000 0.000 chr2 171778405 171899244
view SLC25A13 137 46 89 42 0 0 0.531 0.178 0.345 0.163 0.000 0.000 chr7 96115220 96327098
view SLC25A14 79 21 171 79 0 0 0.306 0.081 0.663 0.306 0.000 0.000 chrX 130334919 130378357