Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SLC35A3 95 22 125 64 0 0 0.368 0.085 0.484 0.248 0.000 0.000 chr1 99964996 100040634
view SLC35A4 203 69 52 34 0 0 0.787 0.267 0.202 0.132 0.000 0.000 chr5 140559828 140574100
view SLC35A5 185 61 63 39 0 0 0.717 0.236 0.244 0.151 0.000 0.000 chr3 112557045 112590579
view SLC35B1 208 74 44 26 0 0 0.806 0.287 0.171 0.101 0.000 0.000 chr17 49695943 49712964
view SLC35B2 216 74 41 30 1 1 0.837 0.287 0.159 0.116 0.004 0.004 chr6 44249101 44262528
view SLC35B3 205 71 47 30 0 0 0.795 0.275 0.182 0.116 0.000 0.000 chr6 8406435 8440545
view SLC35B4 171 60 78 40 0 0 0.663 0.233 0.302 0.155 0.000 0.000 chr7 134284332 134321930
view SLC35C1 213 74 43 30 0 0 0.826 0.287 0.167 0.116 0.000 0.000 chr11 45800149 45818016
view SLC35C2 198 66 59 38 0 0 0.767 0.256 0.229 0.147 0.000 0.000 chr20 46340984 46369425
view SLC35D1 154 44 84 43 0 0 0.597 0.171 0.326 0.167 0.000 0.000 chr1 66994350 67059148
view SLC35D2 141 42 97 52 0 0 0.547 0.163 0.376 0.202 0.000 0.000 chr9 96315710 96388711
view SLC35D3 221 76 35 27 0 0 0.857 0.295 0.136 0.105 0.000 0.000 chr6 136917301 136930660
view SLC35E1 174 49 75 49 0 0 0.674 0.190 0.291 0.190 0.000 0.000 chr19 16544837 16577415
view SLC35E2B 173 61 79 39 0 0 0.671 0.236 0.306 0.151 0.000 0.000 chr1 1656478 1697795
view SLC35E3 217 79 35 20 0 0 0.841 0.306 0.136 0.078 0.000 0.000 chr12 68741176 68786468
view SLC35E4 211 74 39 25 1 1 0.818 0.287 0.151 0.097 0.004 0.004 chr22 30630781 30652893
view SLC35F1 91 16 84 49 0 0 0.353 0.062 0.326 0.190 0.000 0.000 chr6 117902264 118322671
view SLC35F2 170 57 70 39 0 0 0.659 0.221 0.271 0.151 0.000 0.000 chr11 107785991 107863787
view SLC35F3 79 8 76 49 0 0 0.306 0.031 0.295 0.190 0.000 0.000 chr1 233899676 234329511
view SLC35F4 109 24 82 51 0 0 0.422 0.093 0.318 0.198 0.000 0.000 chr14 57558920 57871092
view SLC35F5 171 52 75 47 0 0 0.663 0.202 0.291 0.182 0.000 0.000 chr2 113701709 113761642
view SLC35F6 150 33 91 57 1 0 0.581 0.128 0.353 0.221 0.004 0.000 chr2 26759284 26786231
view SLC35G1 157 42 98 60 0 0 0.609 0.163 0.380 0.233 0.000 0.000 chr10 93888978 93908824
view SLC35G2 158 37 83 53 0 0 0.612 0.143 0.322 0.205 0.000 0.000 chr3 136814126 136860888
view SLC35G3 238 93 20 12 0 0 0.922 0.360 0.078 0.047 0.000 0.000 chr17 35187520 35199393
view SLC35G4 221 83 36 21 0 0 0.857 0.322 0.140 0.081 0.000 0.000 chr18 11604596 11615612
view SLC35G5 210 71 48 34 0 0 0.814 0.275 0.186 0.132 0.000 0.000 chr8 11326012 11337360
view SLC35G6 205 65 49 36 0 0 0.795 0.252 0.190 0.140 0.000 0.000 chr17 7476446 7488496
view SLC36A1 201 69 48 28 0 0 0.779 0.267 0.186 0.109 0.000 0.000 chr5 151442603 151497379
view SLC36A2 178 58 72 43 0 0 0.690 0.225 0.279 0.167 0.000 0.000 chr5 151309972 151352559
view SLC36A3 201 73 46 25 1 1 0.779 0.283 0.178 0.097 0.004 0.004 chr5 151271358 151308766
view SLC36A4 185 65 66 33 0 0 0.717 0.252 0.256 0.128 0.000 0.000 chr11 93139174 93202991
view SLC37A1 177 55 55 34 0 0 0.686 0.213 0.213 0.132 0.000 0.000 chr21 42508852 42586426
view SLC37A2 211 73 38 26 0 0 0.818 0.283 0.147 0.101 0.000 0.000 chr11 125058305 125095516
view SLC37A3 172 51 61 36 0 0 0.667 0.198 0.236 0.140 0.000 0.000 chr7 140328752 140403530
view SLC38A10 106 16 93 51 0 0 0.411 0.062 0.360 0.198 0.000 0.000 chr17 81239811 81300307
view SLC38A11 187 70 60 31 0 0 0.725 0.271 0.233 0.120 0.000 0.000 chr2 164889354 164960525
view SLC38A1 164 63 61 31 0 0 0.636 0.244 0.236 0.120 0.000 0.000 chr12 46178063 46274043
view SLC38A2 201 77 53 26 1 1 0.779 0.298 0.205 0.101 0.004 0.004 chr12 46353188 46377773
view SLC38A3 172 55 78 42 0 0 0.667 0.213 0.302 0.163 0.000 0.000 chr3 50200271 50226486
view SLC38A4 191 74 52 24 0 0 0.740 0.287 0.202 0.093 0.000 0.000 chr12 46759761 46830997
view SLC38A5 92 24 162 78 1 0 0.357 0.093 0.628 0.302 0.004 0.000 chrX 48453544 48475260
view SLC38A6 159 63 79 35 0 0 0.616 0.244 0.306 0.136 0.000 0.000 chr14 60976245 61057630
view SLC38A7 195 67 57 34 0 0 0.756 0.260 0.221 0.132 0.000 0.000 chr16 58660109 58689770
view SLC38A8 223 78 29 23 0 0 0.864 0.302 0.112 0.089 0.000 0.000 chr16 84004667 84047795
view SLC38A9 174 65 71 35 0 0 0.674 0.252 0.275 0.136 0.000 0.000 chr5 55620848 55717324
view SLC39A10 187 67 64 34 0 0 0.725 0.260 0.248 0.132 0.000 0.000 chr2 195652226 195742700
view SLC39A11 89 13 72 43 0 0 0.345 0.050 0.279 0.167 0.000 0.000 chr17 72640949 73097688
view SLC39A12 183 54 44 26 0 0 0.709 0.209 0.171 0.101 0.000 0.000 chr10 17946918 18048285
view SLC39A13 203 73 49 28 2 0 0.787 0.283 0.190 0.109 0.008 0.000 chr11 47403590 47421496