Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SLC26A7 104 14 104 68 0 0 0.403 0.054 0.403 0.264 0.000 0.000 chr8 91244319 91403155
view SLC26A8 152 45 77 44 0 0 0.589 0.174 0.298 0.171 0.000 0.000 chr6 35938516 36029641
view SLC26A9 199 62 48 35 0 0 0.771 0.240 0.186 0.136 0.000 0.000 chr1 205908052 205948456
view SLC27A1 174 53 63 38 0 0 0.674 0.205 0.244 0.147 0.000 0.000 chr19 17465524 17511168
view SLC27A2 180 55 61 39 0 0 0.698 0.213 0.236 0.151 0.000 0.000 chr15 50177196 50241385
view SLC27A3 224 78 32 25 0 0 0.868 0.302 0.124 0.097 0.000 0.000 chr1 153770407 153785157
view SLC27A4 171 61 76 40 0 0 0.663 0.236 0.295 0.155 0.000 0.000 chr9 128335527 128366470
view SLC27A5 211 73 45 30 0 0 0.818 0.283 0.174 0.116 0.000 0.000 chr19 58493333 58516992
view SLC27A6 178 54 62 37 0 0 0.690 0.209 0.240 0.143 0.000 0.000 chr5 128960488 129038635
view SLC28A1 197 66 47 29 0 0 0.764 0.256 0.182 0.112 0.000 0.000 chr15 84879662 84950798
view SLC28A2 151 40 95 55 0 0 0.585 0.155 0.368 0.213 0.000 0.000 chr15 45247234 45282846
view SLC28A3 182 61 63 36 0 0 0.705 0.236 0.244 0.140 0.000 0.000 chr9 84270457 84345758
view SLC29A1 212 72 39 28 1 1 0.822 0.279 0.151 0.109 0.004 0.004 chr6 44218595 44239142
view SLC29A2 198 70 55 31 0 0 0.767 0.271 0.213 0.120 0.000 0.000 chr11 66357521 66376760
view SLC29A3 204 69 39 24 0 0 0.791 0.267 0.151 0.093 0.000 0.000 chr10 71314259 71368385
view SLC29A4 203 57 36 29 0 0 0.787 0.221 0.140 0.112 0.000 0.000 chr7 5277943 5311912
view SLC2A10 180 65 63 30 1 1 0.698 0.252 0.244 0.116 0.004 0.004 chr20 46704649 46741347
view SLC2A11 207 70 42 28 0 0 0.802 0.271 0.163 0.109 0.000 0.000 chr22 23852875 23891312
view SLC2A12 168 48 60 36 0 0 0.651 0.186 0.233 0.140 0.000 0.000 chr6 133982581 134057624
view SLC2A13 106 38 85 42 0 0 0.411 0.147 0.329 0.163 0.000 0.000 chr12 39750025 40111081
view SLC2A14 174 50 60 38 0 0 0.674 0.194 0.233 0.147 0.000 0.000 chr12 7807514 7877915
view SLC2A1 197 68 50 29 0 0 0.764 0.264 0.194 0.112 0.000 0.000 chr1 42920353 42963868
view SLC2A2 163 53 89 50 0 0 0.632 0.205 0.345 0.194 0.000 0.000 chr3 170991347 171031720
view SLC2A3 209 75 40 26 5 3 0.810 0.291 0.155 0.101 0.019 0.012 chr12 7914230 7941187
view SLC2A4RG 207 65 42 32 0 0 0.802 0.252 0.163 0.124 0.000 0.000 chr20 63734776 63749050
view SLC2A4 219 78 37 25 1 1 0.849 0.302 0.143 0.097 0.004 0.004 chr17 7276718 7293257
view SLC2A5 167 51 70 39 0 0 0.647 0.198 0.271 0.151 0.000 0.000 chr1 9030106 9074635
view SLC2A6 218 75 35 27 1 0 0.845 0.291 0.136 0.105 0.004 0.000 chr9 133466094 133484099
view SLC2A7 220 78 29 19 0 0 0.853 0.302 0.112 0.074 0.000 0.000 chr1 8997973 9031423
view SLC2A8 208 73 48 30 0 0 0.806 0.283 0.186 0.116 0.000 0.000 chr9 127392169 127412898
view SLC2A9 167 55 60 35 0 0 0.647 0.213 0.233 0.136 0.000 0.000 chr4 9821224 10026497
view SLC30A10 212 74 43 29 0 0 0.822 0.287 0.167 0.112 0.000 0.000 chr1 219905445 219933557
view SLC30A1 217 87 37 15 0 0 0.841 0.337 0.143 0.058 0.000 0.000 chr1 211566568 211584161
view SLC30A2 180 53 77 51 0 0 0.698 0.205 0.298 0.198 0.000 0.000 chr1 26032252 26051118
view SLC30A3 159 45 95 59 0 0 0.616 0.174 0.368 0.229 0.000 0.000 chr2 27248684 27268047
view SLC30A4 158 56 76 34 0 0 0.612 0.217 0.295 0.132 0.000 0.000 chr15 45474606 45527755
view SLC30A5 203 72 49 28 0 0 0.787 0.279 0.190 0.109 0.000 0.000 chr5 69089014 69136069
view SLC30A6 187 66 60 33 0 0 0.725 0.256 0.233 0.128 0.000 0.000 chr2 32160864 32229379
view SLC30A7 110 25 108 58 0 0 0.426 0.097 0.419 0.225 0.000 0.000 chr1 100891090 100986757
view SLC30A8 163 53 79 45 0 0 0.632 0.205 0.306 0.174 0.000 0.000 chr8 117129995 117181714
view SLC30A9 81 10 150 81 0 0 0.314 0.039 0.581 0.314 0.000 0.000 chr4 41985530 42095461
view SLC31A1 208 80 40 18 1 1 0.806 0.310 0.155 0.070 0.004 0.004 chr9 113216544 113269492
view SLC31A2 228 93 27 11 0 0 0.884 0.360 0.105 0.043 0.000 0.000 chr9 113146007 113169140
view SLC32A1 214 77 44 28 0 0 0.829 0.298 0.171 0.109 0.000 0.000 chr20 38719486 38734372
view SLC33A1 195 53 51 42 0 0 0.756 0.205 0.198 0.163 0.000 0.000 chr3 155816024 155859427
view SLC34A1 215 75 37 26 0 0 0.833 0.291 0.143 0.101 0.000 0.000 chr5 177379434 177403848
view SLC34A2 216 74 32 24 0 0 0.837 0.287 0.124 0.093 0.000 0.000 chr4 25650851 25683748
view SLC34A3 209 67 45 34 0 0 0.810 0.260 0.174 0.132 0.000 0.000 chr9 137225901 137241555
view SLC35A1 198 69 48 29 1 1 0.767 0.267 0.186 0.112 0.004 0.004 chr6 87467974 87517336
view SLC35A2 84 19 167 79 0 0 0.326 0.074 0.647 0.306 0.000 0.000 chrX 48898183 48916646