Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view SLC39A14 161 45 81 50 0 0 0.624 0.174 0.314 0.194 0.000 0.000 chr8 22362278 22427736
view SLC39A1 197 69 59 36 1 0 0.764 0.267 0.229 0.140 0.004 0.000 chr1 153954110 153968537
view SLC39A2 232 87 24 16 1 1 0.899 0.337 0.093 0.062 0.004 0.004 chr14 20994293 21006871
view SLC39A3 204 73 53 32 1 0 0.791 0.283 0.205 0.124 0.004 0.000 chr19 2727524 2745017
view SLC39A4 210 68 43 32 0 0 0.814 0.264 0.167 0.124 0.000 0.000 chr8 144407414 144421844
view SLC39A5 195 67 62 37 0 0 0.756 0.260 0.240 0.143 0.000 0.000 chr12 56225051 56242846
view SLC39A6 204 80 51 22 0 0 0.791 0.310 0.198 0.085 0.000 0.000 chr18 36103531 36134340
view SLC39A7 197 63 52 34 0 0 0.764 0.244 0.202 0.132 0.000 0.000 chr6 33195867 33209437
view SLC39A8 132 28 95 56 0 0 0.512 0.109 0.368 0.217 0.000 0.000 chr4 102256666 102350482
view SLC39A9 162 49 77 43 0 0 0.628 0.190 0.298 0.167 0.000 0.000 chr14 69393692 69467390
view SLC3A1 176 52 62 39 0 0 0.682 0.202 0.240 0.151 0.000 0.000 chr2 44270480 44326494
view SLC3A2 214 77 39 23 0 0 0.829 0.298 0.151 0.089 0.000 0.000 chr11 62875896 62893860
view SLC40A1 172 49 79 51 0 0 0.667 0.190 0.306 0.198 0.000 0.000 chr2 189555590 189585786
view SLC41A1 200 70 51 31 0 0 0.775 0.271 0.198 0.120 0.000 0.000 chr1 205784095 205818198
view SLC41A2 192 81 52 20 0 0 0.744 0.314 0.202 0.078 0.000 0.000 chr12 104796801 104963290
view SLC41A3 184 64 59 35 0 0 0.713 0.248 0.229 0.136 0.000 0.000 chr3 126001357 126089124
view SLC43A1 156 41 86 53 0 0 0.605 0.159 0.333 0.205 0.000 0.000 chr11 57479534 57520702
view SLC43A2 190 49 46 34 0 0 0.736 0.190 0.178 0.132 0.000 0.000 chr17 1564268 1633834
view SLC43A3 164 47 77 45 0 0 0.636 0.182 0.298 0.174 0.000 0.000 chr11 57401954 57432121
view SLC44A1 70 7 138 68 0 0 0.271 0.027 0.535 0.264 0.000 0.000 chr9 105239651 105402346
view SLC44A2 200 82 52 19 0 0 0.775 0.318 0.202 0.074 0.000 0.000 chr19 10620553 10649557
view SLC44A3 179 51 58 37 0 0 0.694 0.198 0.225 0.143 0.000 0.000 chr1 94815357 94900246
view SLC44A4 216 72 37 28 0 0 0.837 0.279 0.143 0.109 0.000 0.000 chr6 31858192 31883997
view SLC44A5 77 6 121 73 0 0 0.298 0.023 0.469 0.283 0.000 0.000 chr1 75197129 75616114
view SLC45A1 193 55 48 36 0 0 0.748 0.213 0.186 0.140 0.000 0.000 chr1 8313114 8349165
view SLC45A2 219 84 30 16 0 0 0.849 0.326 0.116 0.062 0.000 0.000 chr5 33939623 33989693
view SLC45A3 201 64 42 30 0 0 0.779 0.248 0.163 0.116 0.000 0.000 chr1 205652851 205685509
view SLC45A4 93 16 110 54 0 0 0.360 0.062 0.426 0.209 0.000 0.000 chr8 141202174 141313288
view SLC46A1 196 62 54 35 0 0 0.760 0.240 0.209 0.136 0.000 0.000 chr17 28389642 28411212
view SLC46A2 222 79 34 25 1 0 0.860 0.306 0.132 0.097 0.004 0.000 chr9 112873920 112895876
view SLC46A3 212 76 39 24 1 1 0.822 0.295 0.151 0.093 0.004 0.004 chr13 28695080 28723970
view SLC47A1 168 50 73 44 0 0 0.651 0.194 0.283 0.171 0.000 0.000 chr17 19528854 19584034
view SLC47A2 182 58 58 35 0 0 0.705 0.225 0.225 0.136 0.000 0.000 chr17 19673317 19721584
view SLC48A1 217 78 34 23 0 0 0.841 0.302 0.132 0.089 0.000 0.000 chr12 47768238 47787751
view SLC49A3 205 64 46 35 0 0 0.795 0.248 0.178 0.136 0.000 0.000 chr4 676829 694151
view SLC49A4 170 57 71 39 0 0 0.659 0.221 0.275 0.151 0.000 0.000 chr3 122790069 122886139
view SLC4A10 58 10 136 70 0 0 0.225 0.039 0.527 0.271 0.000 0.000 chr2 161619416 161990270
view SLC4A11 222 79 29 19 1 1 0.860 0.306 0.112 0.074 0.004 0.004 chr20 3222422 3244190
view SLC4A1AP 166 60 85 43 0 0 0.643 0.233 0.329 0.167 0.000 0.000 chr2 27658889 27699969
view SLC4A1 202 70 45 28 0 0 0.783 0.271 0.174 0.109 0.000 0.000 chr17 44243390 44273135
view SLC4A2 202 68 47 30 1 1 0.783 0.264 0.182 0.116 0.004 0.004 chr7 151054589 151081523
view SLC4A3 179 52 68 46 0 0 0.694 0.202 0.264 0.178 0.000 0.000 chr2 219622630 219646971
view SLC4A4 75 16 109 61 0 0 0.291 0.062 0.422 0.236 0.000 0.000 chr4 71182259 71577083
view SLC4A4 116 25 99 61 0 0 0.450 0.097 0.384 0.236 0.000 0.000 chr4 71334020 71577083
view SLC4A5 140 47 83 42 0 0 0.543 0.182 0.322 0.163 0.000 0.000 chr2 74211242 74348416
view SLC4A7 150 39 97 61 0 0 0.581 0.151 0.376 0.236 0.000 0.000 chr3 27367723 27489384
view SLC4A8 178 58 70 43 0 0 0.690 0.225 0.271 0.167 0.000 0.000 chr12 51419831 51520763
view SLC4A9 197 65 57 37 0 0 0.764 0.252 0.221 0.143 0.000 0.000 chr5 140355194 140380141
view SLC50A1 176 46 76 54 0 0 0.682 0.178 0.295 0.209 0.000 0.000 chr1 155130852 155143853
view SLC51A 213 65 39 34 0 0 0.826 0.252 0.151 0.132 0.000 0.000 chr3 196211534 196238427