Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view THUMPD2 168 49 81 50 0 0 0.651 0.190 0.314 0.194 0.000 0.000 chr2 39731061 39784258
view THUMPD3 188 64 63 36 0 0 0.729 0.248 0.244 0.140 0.000 0.000 chr3 9358054 9391791
view THY1 191 60 60 39 2 1 0.740 0.233 0.233 0.151 0.008 0.004 chr11 119410476 119428172
view THYN1 229 87 28 17 0 0 0.888 0.337 0.109 0.066 0.000 0.000 chr11 134243282 134258352
view TH 193 56 55 40 0 0 0.748 0.217 0.213 0.155 0.000 0.000 chr11 2158929 2176815
view TIA1 196 68 48 28 0 0 0.760 0.264 0.186 0.109 0.000 0.000 chr2 70204444 70253628
view TIAL1 198 71 53 29 0 0 0.767 0.275 0.205 0.112 0.000 0.000 chr10 119568465 119601964
view TIAM1 105 17 92 59 0 0 0.407 0.066 0.357 0.229 0.000 0.000 chr21 31113418 31349261
view TIAM2 114 19 73 44 0 0 0.442 0.074 0.283 0.171 0.000 0.000 chr6 154990315 155262723
view TICAM1 205 66 47 33 0 0 0.795 0.256 0.182 0.128 0.000 0.000 chr19 4810932 4836712
view TICAM2 200 75 54 27 0 0 0.775 0.291 0.209 0.105 0.000 0.000 chr5 115573496 115607479
view TICRR 171 56 77 45 0 0 0.663 0.217 0.298 0.174 0.000 0.000 chr15 89570469 89633023
view TIE1 199 69 54 32 0 0 0.771 0.267 0.209 0.124 0.000 0.000 chr1 43295982 43328108
view TIFAB 227 83 31 22 0 0 0.880 0.322 0.120 0.085 0.000 0.000 chr5 135439226 135457351
view TIFA 208 83 47 20 0 0 0.806 0.322 0.182 0.078 0.000 0.000 chr4 112269537 112290904
view TIGAR 209 78 43 23 1 1 0.810 0.302 0.167 0.089 0.004 0.004 chr12 4316213 4365028
view TIGD1 219 78 36 24 1 1 0.849 0.302 0.140 0.093 0.004 0.004 chr2 232538883 232555557
view TIGD2 214 82 40 20 2 1 0.829 0.318 0.155 0.078 0.008 0.004 chr4 89106533 89119901
view TIGD3 195 68 60 34 0 0 0.756 0.264 0.233 0.132 0.000 0.000 chr11 65349751 65362613
view TIGD4 211 77 45 26 0 0 0.818 0.298 0.174 0.101 0.000 0.000 chr4 152764354 152784730
view TIGD5 218 76 36 25 0 0 0.845 0.295 0.140 0.097 0.000 0.000 chr8 143592831 143608224
view TIGD6 217 83 41 22 0 0 0.841 0.322 0.159 0.085 0.000 0.000 chr5 149988118 150005654
view TIGD7 193 59 62 43 0 0 0.748 0.229 0.240 0.167 0.000 0.000 chr16 3293808 3310430
view TIGIT 211 74 43 28 0 0 0.818 0.287 0.167 0.109 0.000 0.000 chr3 114289028 114315288
view TIMD4 155 39 84 49 0 0 0.601 0.151 0.326 0.190 0.000 0.000 chr5 156914292 156968226
view TIMELESS 200 76 50 23 0 0 0.775 0.295 0.194 0.089 0.000 0.000 chr12 56411363 56454426
view TIMM10B 199 65 54 37 1 0 0.771 0.252 0.209 0.143 0.004 0.000 chr11 6476501 6489681
view TIMM10 188 54 65 46 1 1 0.729 0.209 0.252 0.178 0.004 0.004 chr11 57523464 57535754
view TIMM13 150 29 80 52 0 0 0.581 0.112 0.310 0.202 0.000 0.000 chr19 2420625 2432586
view TIMM17A 233 87 21 14 0 0 0.903 0.337 0.081 0.054 0.000 0.000 chr1 201950503 201975664
view TIMM17B 88 22 164 77 1 1 0.341 0.085 0.636 0.298 0.004 0.004 chrX 48888449 48902768
view TIMM21 204 74 52 30 0 0 0.791 0.287 0.202 0.116 0.000 0.000 chr18 74143523 74165531
view TIMM22 219 75 35 26 1 1 0.849 0.291 0.136 0.101 0.004 0.004 chr17 992129 1008671
view TIMM23B 187 59 65 41 0 0 0.725 0.229 0.252 0.159 0.000 0.000 chr10 49937053 49979850
view TIMM23 199 76 52 24 1 1 0.771 0.295 0.202 0.093 0.004 0.004 chr10 45967489 46008742
view TIMM29 205 78 51 25 0 0 0.795 0.302 0.198 0.097 0.000 0.000 chr19 10923811 10935254
view TIMM44 191 52 60 46 0 0 0.740 0.202 0.233 0.178 0.000 0.000 chr19 7921718 7948666
view TIMM50 216 80 36 19 0 0 0.837 0.310 0.140 0.074 0.000 0.000 chr19 39475838 39498779
view TIMM8A 94 30 153 67 1 0 0.364 0.116 0.593 0.260 0.004 0.000 chrX 101340661 101353742
view TIMM8B 197 67 59 37 0 0 0.764 0.260 0.229 0.143 0.000 0.000 chr11 112079800 112091756
view TIMM9 188 68 62 31 0 0 0.729 0.264 0.240 0.120 0.000 0.000 chr14 58403495 58432531
view TIMMDC1 214 74 40 28 0 0 0.829 0.287 0.155 0.109 0.000 0.000 chr3 119493547 119530090
view TIMP1 99 30 154 71 0 0 0.384 0.116 0.597 0.275 0.000 0.000 chrX 47577436 47591789
view TIMP2 157 43 69 40 0 0 0.609 0.167 0.267 0.155 0.000 0.000 chr17 78847977 78930387
view TIMP3 183 59 60 38 0 0 0.709 0.229 0.233 0.147 0.000 0.000 chr22 32796705 32868041
view TIMP4 206 79 51 26 0 0 0.798 0.306 0.198 0.101 0.000 0.000 chr3 12148068 12163912
view TINAGL1 219 77 34 23 1 1 0.849 0.298 0.132 0.089 0.004 0.004 chr1 31571515 31592686
view TINAG 186 69 46 29 0 0 0.721 0.267 0.178 0.112 0.000 0.000 chr6 54303441 54395142
view TINCR 198 60 55 40 0 0 0.767 0.233 0.213 0.155 0.000 0.000 chr19 5553167 5572953
view TINF2 211 75 46 29 0 0 0.818 0.291 0.178 0.112 0.000 0.000 chr14 24234643 24247623