Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TGOLN2 196 66 59 37 0 0 0.760 0.256 0.229 0.143 0.000 0.000 chr2 85313027 85332989
view TGS1 184 58 62 43 0 0 0.713 0.225 0.240 0.167 0.000 0.000 chr8 55768446 55831445
view TG 107 17 81 51 0 0 0.415 0.066 0.314 0.198 0.000 0.000 chr8 132861958 133139899
view THADA 102 8 102 65 0 0 0.395 0.031 0.395 0.252 0.000 0.000 chr2 43225851 43601038
view THAP10 209 77 48 28 0 0 0.810 0.298 0.186 0.109 0.000 0.000 chr15 70876342 70897433
view THAP11 142 31 108 68 0 0 0.550 0.120 0.419 0.264 0.000 0.000 chr16 67837320 67849195
view THAP12 190 68 62 35 0 0 0.736 0.264 0.240 0.136 0.000 0.000 chr11 76344956 76386132
view THAP1 156 44 93 54 0 0 0.605 0.171 0.360 0.209 0.000 0.000 chr8 42831674 42848325
view THAP2 186 64 67 37 0 0 0.721 0.248 0.260 0.143 0.000 0.000 chr12 71659301 71685644
view THAP3 204 67 44 29 2 1 0.791 0.260 0.171 0.112 0.008 0.004 chr1 6619868 6638562
view THAP4 194 69 50 26 0 0 0.752 0.267 0.194 0.101 0.000 0.000 chr2 241579405 241642158
view THAP5 211 80 44 23 1 0 0.818 0.310 0.171 0.089 0.004 0.000 chr7 108557132 108574706
view THAP6 205 76 51 27 0 0 0.795 0.295 0.198 0.105 0.000 0.000 chr4 75509473 75535026
view THAP7 215 71 39 32 1 0 0.833 0.275 0.151 0.124 0.004 0.000 chr22 20994104 21007118
view THAP8 219 82 36 20 0 0 0.849 0.318 0.140 0.078 0.000 0.000 chr19 36029984 36059285
view THAP9 193 76 62 27 0 0 0.748 0.295 0.240 0.105 0.000 0.000 chr4 82895735 82924969
view THBD 233 86 23 17 0 0 0.903 0.333 0.089 0.066 0.000 0.000 chr20 23040633 23054672
view THBS1 175 60 73 37 0 0 0.678 0.233 0.283 0.143 0.000 0.000 chr15 39576079 39604466
view THBS2 197 55 47 38 0 0 0.764 0.213 0.182 0.147 0.000 0.000 chr6 169210785 169258846
view THBS3 148 35 94 59 0 0 0.574 0.136 0.364 0.229 0.000 0.000 chr1 155190588 155212897
view THBS4 196 72 51 27 0 0 0.760 0.279 0.198 0.105 0.000 0.000 chr5 80030348 80088287
view THEGL 191 66 37 20 0 0 0.740 0.256 0.143 0.078 0.000 0.000 chr4 56525606 56608507
view THEG 184 50 65 47 0 0 0.713 0.194 0.252 0.182 0.000 0.000 chr19 356747 381026
view THEM4 186 73 62 24 0 0 0.721 0.283 0.240 0.093 0.000 0.000 chr1 151865866 151914511
view THEM5 219 76 33 24 1 1 0.849 0.295 0.128 0.093 0.004 0.004 chr1 151842101 151858712
view THEM6 206 71 51 33 0 0 0.798 0.275 0.198 0.128 0.000 0.000 chr8 142722223 142741927
view THEMIS2 202 57 48 40 0 0 0.783 0.221 0.186 0.155 0.000 0.000 chr1 27867544 27891675
view THEMIS 111 22 99 62 0 0 0.430 0.085 0.384 0.240 0.000 0.000 chr6 127703200 127906058
view THG1L 222 76 34 27 0 0 0.860 0.295 0.132 0.105 0.000 0.000 chr5 157726420 157746449
view THNSL1 205 69 52 35 0 0 0.795 0.267 0.202 0.136 0.000 0.000 chr10 25011612 25031664
view THNSL2 26 3 97 29 0 0 0.101 0.012 0.376 0.112 0.000 0.000 chr2 88165346 88191627
view THOC1 187 60 62 39 0 0 0.725 0.233 0.240 0.151 0.000 0.000 chr18 209520 273047
view THOC2 61 12 171 78 0 0 0.236 0.047 0.663 0.302 0.000 0.000 chrX 123595569 123738052
view THOC3 129 52 40 25 85 24 0.500 0.202 0.155 0.097 0.329 0.093 chr5 175954531 175973315
view THOC5 191 59 50 35 0 0 0.740 0.229 0.194 0.136 0.000 0.000 chr22 29500879 29558757
view THOC6 197 64 56 36 0 0 0.764 0.248 0.217 0.140 0.000 0.000 chr16 3019035 3032750
view THOC7 186 67 64 31 0 0 0.721 0.260 0.248 0.120 0.000 0.000 chr3 63828870 63868805
view THOP1 184 64 57 29 0 0 0.713 0.248 0.221 0.112 0.000 0.000 chr19 2780503 2820807
view THPO 217 72 38 31 0 0 0.841 0.279 0.147 0.120 0.000 0.000 chr3 184366935 184383207
view THRAP3 125 22 94 60 0 0 0.484 0.085 0.364 0.233 0.000 0.000 chr1 36219443 36310357
view THRA 178 51 71 48 0 0 0.690 0.198 0.275 0.186 0.000 0.000 chr17 40057965 40098002
view THRB 88 13 77 47 0 0 0.341 0.050 0.298 0.182 0.000 0.000 chr3 24112153 24499850
view THRSP 203 72 51 30 1 0 0.787 0.279 0.198 0.116 0.004 0.000 chr11 78058861 78073351
view THSD1 157 49 88 49 0 0 0.609 0.190 0.341 0.190 0.000 0.000 chr13 52372167 52411172
view THSD4 58 3 92 52 0 0 0.225 0.012 0.357 0.202 0.000 0.000 chr15 71110471 71788383
view THSD7A 89 21 65 31 0 0 0.345 0.081 0.252 0.120 0.000 0.000 chr7 11365365 11837198
view THSD7B 48 6 95 53 0 0 0.186 0.023 0.368 0.205 0.000 0.000 chr2 136760545 137682718
view THSD8 209 74 45 29 0 0 0.810 0.287 0.174 0.112 0.000 0.000 chr19 12797069 12809389
view THTPA 201 70 51 30 1 1 0.779 0.271 0.198 0.116 0.004 0.004 chr14 23551271 23565271
view THUMPD1 204 74 51 29 1 0 0.791 0.287 0.198 0.112 0.004 0.000 chr16 20728664 20746818