Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TDRD3 135 28 94 64 0 0 0.523 0.109 0.364 0.248 0.000 0.000 chr13 60392220 60578871
view TDRD5 190 63 58 36 0 0 0.736 0.244 0.225 0.140 0.000 0.000 chr1 179586832 179696272
view TDRD6 205 69 45 31 1 0 0.795 0.267 0.174 0.120 0.004 0.000 chr6 46682885 46709319
view TDRD7 177 58 68 39 0 0 0.686 0.225 0.264 0.151 0.000 0.000 chr9 97407096 97501125
view TDRD9 185 60 59 38 0 0 0.717 0.233 0.229 0.147 0.000 0.000 chr14 103923456 104057667
view TDRKH 208 72 47 31 0 0 0.806 0.279 0.182 0.120 0.000 0.000 chr1 151768494 151795500
view TDRP 221 79 22 17 0 0 0.857 0.306 0.085 0.066 0.000 0.000 chr8 484946 549834
view TEAD1 102 21 99 54 0 0 0.395 0.081 0.384 0.209 0.000 0.000 chr11 12669421 12949737
view TEAD2 177 55 69 40 0 0 0.686 0.213 0.267 0.155 0.000 0.000 chr19 49335595 49367416
view TEAD3 197 71 47 22 0 0 0.764 0.275 0.182 0.085 0.000 0.000 chr6 35468597 35502079
view TEAD4 137 21 75 52 0 0 0.531 0.081 0.291 0.202 0.000 0.000 chr12 2954397 3045676
view TECPR1 172 57 62 33 1 1 0.667 0.221 0.240 0.128 0.004 0.004 chr7 98209624 98257232
view TECPR2 166 48 58 38 0 0 0.643 0.186 0.225 0.147 0.000 0.000 chr14 102357941 102507477
view TECRL 135 32 89 56 0 0 0.523 0.124 0.345 0.217 0.000 0.000 chr4 64272702 64414450
view TECR 165 37 69 49 0 0 0.640 0.143 0.267 0.190 0.000 0.000 chr19 14524594 14570980
view TECTA 173 58 68 39 0 0 0.671 0.225 0.264 0.151 0.000 0.000 chr11 121096243 121196490
view TECTB 218 77 28 17 0 0 0.845 0.298 0.109 0.066 0.000 0.000 chr10 112278400 112310038
view TEC 172 55 59 40 0 0 0.667 0.213 0.229 0.155 0.000 0.000 chr4 48130783 48274838
view TEDC1 217 73 35 26 0 0 0.841 0.283 0.136 0.101 0.000 0.000 chr14 105486246 105504248
view TEDC2 188 56 63 43 0 0 0.729 0.217 0.244 0.167 0.000 0.000 chr16 2455109 2469963
view TEDDM1 208 73 49 31 0 0 0.806 0.283 0.190 0.120 0.000 0.000 chr1 182393117 182405667
view TEFM 181 54 77 51 0 0 0.702 0.209 0.298 0.198 0.000 0.000 chr17 30893986 30911238
view TEF 192 67 61 34 0 0 0.744 0.260 0.236 0.132 0.000 0.000 chr22 41376942 41404326
view TEKT1 202 65 38 23 0 0 0.783 0.252 0.147 0.089 0.000 0.000 chr17 6792993 6836729
view TEKT2 210 80 46 23 1 1 0.814 0.310 0.178 0.089 0.004 0.004 chr1 36079094 36093275
view TEKT3 198 71 46 27 0 0 0.767 0.275 0.178 0.105 0.000 0.000 chr17 15298812 15346597
view TEKT4 212 73 44 30 0 0 0.822 0.283 0.171 0.116 0.000 0.000 chr2 94866430 94881823
view TEKT5 193 61 42 27 0 0 0.748 0.236 0.163 0.105 0.000 0.000 chr16 10622501 10699930
view TEKTIP1 220 73 32 26 0 0 0.853 0.283 0.124 0.101 0.000 0.000 chr19 3534174 3549030
view TEK 169 45 55 43 0 0 0.655 0.174 0.213 0.167 0.000 0.000 chr9 27104225 27235174
view TELO2 222 79 30 22 1 0 0.860 0.306 0.116 0.085 0.004 0.000 chr16 1488360 1515454
view TEN1 189 59 61 39 0 0 0.733 0.229 0.236 0.151 0.000 0.000 chr17 75974240 76005586
view TENM1 9 0 198 80 0 0 0.035 0.000 0.767 0.310 0.000 0.000 chrX 124370903 125209312
view TENM2 27 0 110 59 0 0 0.105 0.000 0.426 0.229 0.000 0.000 chr5 166974029 168269157
view TENM3 70 7 89 52 0 0 0.271 0.027 0.345 0.202 0.000 0.000 chr4 182238402 182808024
view TENM4 46 2 87 45 0 0 0.178 0.008 0.337 0.174 0.000 0.000 chr11 78647829 79446030
view TENT2 171 58 69 39 0 0 0.663 0.225 0.267 0.151 0.000 0.000 chr5 79607441 79693246
view TENT4A 193 61 61 40 0 0 0.748 0.236 0.236 0.155 0.000 0.000 chr5 6708432 6762044
view TENT4B 155 44 86 52 0 0 0.601 0.171 0.333 0.202 0.000 0.000 chr16 50148306 50240310
view TENT5A 222 81 32 20 0 0 0.860 0.314 0.124 0.078 0.000 0.000 chr6 81740730 81757681
view TENT5B 143 37 111 66 1 0 0.554 0.143 0.430 0.256 0.004 0.000 chr1 27000020 27017850
view TENT5C 196 71 57 30 0 0 0.760 0.275 0.221 0.116 0.000 0.000 chr1 117601048 117633389
view TENT5D 85 21 166 79 0 0 0.329 0.081 0.643 0.306 0.000 0.000 chrX 80415447 80450309
view TEP1 199 63 42 28 0 0 0.771 0.244 0.163 0.109 0.000 0.000 chr14 20360667 20418501
view TEPP 222 81 36 24 0 0 0.860 0.314 0.140 0.093 0.000 0.000 chr16 57971544 57993116
view TEPSIN 182 52 66 48 0 0 0.705 0.202 0.256 0.186 0.000 0.000 chr17 81223277 81244055
view TERB1 175 57 75 42 0 0 0.678 0.221 0.291 0.163 0.000 0.000 chr16 66749640 66806584
view TERB2 172 61 78 39 0 0 0.667 0.236 0.302 0.151 0.000 0.000 chr15 44951687 44984229
view TERF1 170 47 77 48 0 0 0.659 0.182 0.298 0.186 0.000 0.000 chr8 73003864 73053123
view TERF2IP 194 64 57 36 0 0 0.752 0.248 0.221 0.140 0.000 0.000 chr16 75642773 75662432