Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TCEANC2 176 63 68 34 0 0 0.682 0.244 0.264 0.132 0.000 0.000 chr1 54048608 54111082
view TCEANC 97 28 159 75 0 0 0.376 0.109 0.616 0.291 0.000 0.000 chrX 13648141 13670409
view TCERG1L 161 41 47 33 0 0 0.624 0.159 0.182 0.128 0.000 0.000 chr10 131087391 131316721
view TCERG1 159 54 83 41 0 0 0.616 0.209 0.322 0.159 0.000 0.000 chr5 146442333 146516961
view TCF12 164 46 73 47 0 0 0.636 0.178 0.283 0.182 0.000 0.000 chr15 56913644 57294853
view TCF15 214 73 38 28 2 0 0.829 0.283 0.147 0.109 0.008 0.000 chr20 599257 615309
view TCF19 225 82 29 19 0 0 0.872 0.318 0.112 0.074 0.000 0.000 chr6 31153589 31169215
view TCF20 177 58 62 38 0 0 0.686 0.225 0.240 0.147 0.000 0.000 chr22 42155013 42275653
view TCF21 217 75 39 28 0 0 0.841 0.291 0.151 0.109 0.000 0.000 chr6 133884113 133897257
view TCF23 192 62 63 40 0 0 0.744 0.240 0.244 0.155 0.000 0.000 chr2 27144004 27161974
view TCF24 154 45 100 57 0 0 0.597 0.174 0.388 0.221 0.000 0.000 chr8 66941501 66967591
view TCF25 149 27 84 54 0 0 0.578 0.105 0.326 0.209 0.000 0.000 chr16 89868592 89916379
view TCF3 175 43 58 41 0 0 0.678 0.167 0.225 0.159 0.000 0.000 chr19 1604292 1657615
view TCF4 60 6 119 61 0 0 0.233 0.023 0.461 0.236 0.000 0.000 chr18 55217185 55593192
view TCF7L1 117 21 89 55 0 0 0.453 0.081 0.345 0.213 0.000 0.000 chr2 85128392 85315387
view TCF7L2 99 8 92 58 0 0 0.384 0.031 0.357 0.225 0.000 0.000 chr10 112945247 113172678
view TCF7 171 51 73 45 0 0 0.663 0.198 0.283 0.174 0.000 0.000 chr5 134109681 134153210
view TCFL5 194 57 51 37 0 0 0.752 0.221 0.198 0.143 0.000 0.000 chr20 62836005 62866822
view TCHHL1 187 56 66 44 0 0 0.725 0.217 0.256 0.171 0.000 0.000 chr1 152079141 152094064
view TCHH 200 68 52 32 0 0 0.775 0.264 0.202 0.124 0.000 0.000 chr1 152101317 152120444
view TCHP 165 50 85 49 0 0 0.640 0.194 0.329 0.190 0.000 0.000 chr12 109895274 109923069
view TCIM 224 85 32 19 0 0 0.868 0.329 0.124 0.074 0.000 0.000 chr8 40148482 40160310
view TCIRG1 193 59 63 45 0 0 0.748 0.229 0.244 0.174 0.000 0.000 chr11 68034025 68055895
view TCL1A 186 64 60 39 10 0 0.721 0.248 0.233 0.151 0.039 0.000 chr14 95704947 95719125
view TCL1B 222 82 36 23 0 0 0.860 0.318 0.140 0.089 0.000 0.000 chr14 95681426 95697628
view TCN1 167 42 86 60 0 0 0.647 0.163 0.333 0.233 0.000 0.000 chr11 59847808 59871487
view TCN2 232 85 22 16 0 0 0.899 0.329 0.085 0.062 0.000 0.000 chr22 30602174 30632271
view TCOF1 180 52 63 44 0 0 0.698 0.202 0.244 0.171 0.000 0.000 chr5 150352697 150405293
view TCP10L 197 62 59 42 1 0 0.764 0.240 0.229 0.163 0.004 0.000 chr21 32568721 32590523
view TCP11L1 194 74 58 26 0 0 0.752 0.287 0.225 0.101 0.000 0.000 chr11 33034572 33078550
view TCP11L2 171 43 72 54 0 0 0.663 0.167 0.279 0.209 0.000 0.000 chr12 106297733 106352003
view TCP11X1 15 1 39 12 0 0 0.058 0.004 0.151 0.047 0.000 0.000 chrX 102210301 102231795
view TCP11X2 160 71 50 17 41 12 0.620 0.275 0.194 0.066 0.159 0.047 chrX 102455315 102476812
view TCP11 205 78 45 23 1 1 0.795 0.302 0.174 0.089 0.004 0.004 chr6 35113075 35146339
view TCP1 201 69 53 34 0 0 0.779 0.267 0.205 0.132 0.000 0.000 chr6 159773498 159794602
view TCTA 173 46 82 56 0 0 0.671 0.178 0.318 0.217 0.000 0.000 chr3 49407423 49421476
view TCTE1 181 59 69 39 0 0 0.702 0.229 0.267 0.151 0.000 0.000 chr6 44273734 44302698
view TCTN1 141 30 106 66 0 0 0.547 0.116 0.411 0.256 0.000 0.000 chr12 110609129 110654430
view TCTN2 117 11 127 83 0 0 0.453 0.043 0.492 0.322 0.000 0.000 chr12 123666113 123713399
view TCTN3 199 66 50 34 0 0 0.771 0.256 0.194 0.132 0.000 0.000 chr10 95658401 95698927
view TDGF1P3 68 16 186 86 1 0 0.264 0.062 0.721 0.333 0.004 0.000 chrX 110515896 110528021
view TDGF1 221 82 35 22 0 0 0.857 0.318 0.136 0.085 0.000 0.000 chr3 46572788 46587457
view TDG 221 79 33 22 0 0 0.857 0.306 0.128 0.085 0.000 0.000 chr12 103960872 103993874
view TDO2 188 59 62 39 0 0 0.729 0.229 0.240 0.151 0.000 0.000 chr4 155898696 155925406
view TDP1 131 37 94 53 0 0 0.508 0.143 0.364 0.205 0.000 0.000 chr14 89950927 90049764
view TDP2 208 72 49 32 0 0 0.806 0.279 0.190 0.124 0.000 0.000 chr6 24644979 24671899
view TDRD10 165 53 77 40 0 0 0.640 0.205 0.298 0.155 0.000 0.000 chr1 154497219 154553147
view TDRD12 189 71 60 29 0 0 0.733 0.275 0.233 0.112 0.000 0.000 chr19 32714767 32834580
view TDRD15 175 63 78 39 0 0 0.678 0.244 0.302 0.151 0.000 0.000 chr2 21118968 21149368
view TDRD1 151 50 85 41 0 0 0.585 0.194 0.329 0.159 0.000 0.000 chr10 114174353 114237666