Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TANK 156 52 83 44 0 0 0.605 0.202 0.322 0.171 0.000 0.000 chr2 161155428 161241230
view TAOK1 162 43 80 51 0 0 0.628 0.167 0.310 0.198 0.000 0.000 chr17 29385363 29556903
view TAOK2 172 57 73 39 0 0 0.667 0.221 0.283 0.151 0.000 0.000 chr16 29968868 29993393
view TAOK3 156 53 68 32 0 0 0.605 0.205 0.264 0.124 0.000 0.000 chr12 118144801 118377907
view TAP1 236 90 18 11 0 0 0.915 0.349 0.070 0.043 0.000 0.000 chr6 32840209 32858704
view TAP2 242 91 16 14 0 0 0.938 0.353 0.062 0.054 0.000 0.000 chr6 32820415 32843739
view TAPBPL 229 88 25 15 1 0 0.888 0.341 0.097 0.058 0.004 0.000 chr12 6447042 6467316
view TAPBP 192 58 58 41 0 0 0.744 0.225 0.225 0.159 0.000 0.000 chr6 33294694 33319078
view TAPT1 190 66 57 33 0 0 0.736 0.256 0.221 0.128 0.000 0.000 chr4 16155505 16231471
view TARBP1 136 33 84 45 0 0 0.527 0.128 0.326 0.174 0.000 0.000 chr1 234386313 234484179
view TARBP2 166 43 87 58 0 0 0.643 0.167 0.337 0.225 0.000 0.000 chr12 53496283 53511431
view TARDBP 179 60 69 40 0 0 0.694 0.233 0.267 0.155 0.000 0.000 chr1 11007654 11030492
view TARM1 204 68 49 33 0 0 0.791 0.264 0.190 0.128 0.000 0.000 chr19 54064895 54086365
view TARP 228 86 28 18 0 0 0.884 0.333 0.109 0.070 0.000 0.000 chr7 38254643 38278636
view TARS1 205 76 47 26 0 0 0.795 0.295 0.182 0.101 0.000 0.000 chr5 33435965 33473086
view TARS2 199 69 55 33 0 0 0.771 0.267 0.213 0.128 0.000 0.000 chr1 150482419 150512602
view TARS3 138 31 96 62 0 0 0.535 0.120 0.372 0.240 0.000 0.000 chr15 101648596 101729473
view TAS1R1 199 60 47 37 0 0 0.771 0.233 0.182 0.143 0.000 0.000 chr1 6550307 6584755
view TAS1R2 213 71 40 29 0 0 0.826 0.275 0.155 0.112 0.000 0.000 chr1 18834599 18864660
view TAS1R3 192 56 61 44 0 0 0.744 0.217 0.236 0.171 0.000 0.000 chr1 1326280 1340314
view TAS2R10 210 72 45 30 1 1 0.814 0.279 0.174 0.116 0.004 0.004 chr12 10820219 10831358
view TAS2R13 203 74 53 30 0 0 0.787 0.287 0.205 0.116 0.000 0.000 chr12 10902926 10914562
view TAS2R14 205 69 51 34 0 0 0.795 0.267 0.198 0.132 0.000 0.000 chr12 10932410 10944263
view TAS2R16 207 73 47 29 1 0 0.802 0.283 0.182 0.112 0.004 0.000 chr7 122989704 123000700
view TAS2R19 208 72 47 30 0 0 0.806 0.279 0.182 0.116 0.000 0.000 chr12 11016619 11027620
view TAS2R1 228 86 26 17 1 0 0.884 0.333 0.101 0.066 0.004 0.000 chr5 9622347 9635351
view TAS2R20 209 76 49 29 0 0 0.810 0.295 0.190 0.112 0.000 0.000 chr12 10990961 11003304
view TAS2R30 192 63 64 42 1 0 0.744 0.244 0.248 0.163 0.004 0.000 chr12 11127958 11139644
view TAS2R31 221 83 37 22 0 0 0.857 0.322 0.143 0.085 0.000 0.000 chr12 11025387 11036407
view TAS2R38 218 80 37 24 2 0 0.845 0.310 0.143 0.093 0.008 0.000 chr7 141967631 141978773
view TAS2R39 183 58 74 47 0 0 0.709 0.225 0.287 0.182 0.000 0.000 chr7 143178419 143189435
view TAS2R3 205 71 50 31 1 1 0.795 0.275 0.194 0.120 0.004 0.004 chr7 141759097 141770197
view TAS2R40 165 41 89 61 0 0 0.640 0.159 0.345 0.236 0.000 0.000 chr7 143217037 143228079
view TAS2R41 227 84 29 19 1 1 0.880 0.326 0.112 0.074 0.004 0.004 chr7 143472873 143483796
view TAS2R42 213 76 43 27 0 0 0.826 0.295 0.167 0.105 0.000 0.000 chr12 11180993 11191937
view TAS2R43 100 44 124 49 1 0 0.388 0.171 0.481 0.190 0.004 0.000 chr12 11086287 11097313
view TAS2R46 147 45 31 18 78 40 0.570 0.174 0.120 0.070 0.302 0.155 chr12 11056365 11067294
view TAS2R4 222 85 34 18 0 0 0.860 0.329 0.132 0.070 0.000 0.000 chr7 141771674 141786691
view TAS2R50 197 67 59 36 0 0 0.764 0.260 0.229 0.140 0.000 0.000 chr12 10980913 10991912
view TAS2R5 210 78 46 25 1 1 0.814 0.302 0.178 0.097 0.004 0.004 chr7 141785217 141796367
view TAS2R60 224 82 32 22 0 0 0.868 0.318 0.124 0.085 0.000 0.000 chr7 143438453 143449409
view TAS2R7 203 66 51 37 2 0 0.787 0.256 0.198 0.143 0.008 0.000 chr12 10796532 10807627
view TAS2R8 204 67 51 36 1 0 0.791 0.260 0.198 0.140 0.004 0.000 chr12 10801051 10812286
view TAS2R9 203 69 49 31 1 0 0.787 0.267 0.190 0.120 0.004 0.000 chr12 10804094 10815168
view TASL 96 28 156 73 0 0 0.372 0.109 0.605 0.283 0.000 0.000 chrX 30553809 30582766
view TASOR2 194 73 55 26 0 0 0.752 0.283 0.213 0.101 0.000 0.000 chr10 5679838 5768740
view TASOR 180 68 69 32 0 0 0.698 0.264 0.267 0.124 0.000 0.000 chr3 56615132 56688265
view TASP1 144 47 84 45 0 0 0.558 0.182 0.326 0.174 0.000 0.000 chr20 13384394 13643932
view TATDN1 168 59 79 38 0 0 0.651 0.229 0.306 0.147 0.000 0.000 chr8 124483498 124544085
view TATDN2 182 52 62 44 0 0 0.705 0.202 0.240 0.171 0.000 0.000 chr3 10243459 10286218