Genic Haplotype Summary

Detail View Genename ALL BOTH
# of samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 JPT BOTH
# of JPT samples with two haploids were completely assembled. For the case, cataloged to JoGo haplotype database
 ALL SINGLE
# of samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample and cataloged in JoGo haplotype database. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 ALL BOTH
# of samples with two haploids were completely assembled/# of total samples
 JPT BOTH
# of JPT samples with two haploids were completely assembled/# of total JPT samples
 ALL SINGLE
# of samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 JPT SINGLE
# of JPT samples with one haploid was assembled/# of total samples. For chrX and chrY in male, the ALL SINGLE status means completely cataloged from the sample. For chr1-22 and chrX in female, the assembly was imcomplete and did not catalog in JoGo haplotype database
 ALL MULTI
# of samples with more than two haploid was assembled/# of total samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 JPT MULTI
# of JPT samples with more than two haploid was assembled/# of total JPT samples. For the case, two haploids cannot correctly assembled and did not catalog in JoGo haplotype database
 Chr Start End
view TFAP2A 183 62 62 34 0 0 0.709 0.240 0.240 0.132 0.000 0.000 chr6 10391677 10420074
view TFAP2B 190 63 61 39 0 0 0.736 0.244 0.236 0.151 0.000 0.000 chr6 50813871 50852619
view TFAP2C 179 50 73 50 0 0 0.694 0.194 0.283 0.194 0.000 0.000 chr20 56624306 56644283
view TFAP2D 166 47 77 49 0 0 0.643 0.182 0.298 0.190 0.000 0.000 chr6 50708526 50778033
view TFAP2E 184 63 68 36 0 0 0.713 0.244 0.264 0.140 0.000 0.000 chr1 35568314 35600328
view TFAP4 201 67 52 35 0 0 0.779 0.260 0.202 0.136 0.000 0.000 chr16 4252186 4278023
view TFB1M 173 60 69 38 0 0 0.671 0.233 0.267 0.147 0.000 0.000 chr6 155251134 155319484
view TFB2M 222 80 29 20 0 0 0.860 0.310 0.112 0.078 0.000 0.000 chr1 246535561 246571261
view TFCP2L1 188 64 43 24 0 0 0.729 0.248 0.167 0.093 0.000 0.000 chr2 121211587 121290202
view TFCP2 173 50 64 38 0 0 0.671 0.194 0.248 0.147 0.000 0.000 chr12 51088656 51178135
view TFDP1 173 46 70 47 0 0 0.671 0.178 0.271 0.182 0.000 0.000 chr13 113579753 113646473
view TFDP2 125 33 89 54 0 0 0.484 0.128 0.345 0.209 0.000 0.000 chr3 141939428 142154544
view TFDP3 62 15 191 87 1 0 0.240 0.058 0.740 0.337 0.004 0.000 chrX 133211662 133223354
view TFE3 66 8 181 88 1 0 0.256 0.031 0.702 0.341 0.004 0.000 chrX 49023726 49048357
view TFEB 202 62 44 35 0 0 0.783 0.240 0.171 0.136 0.000 0.000 chr6 41678978 41740608
view TFEC 196 63 50 37 0 0 0.760 0.244 0.194 0.143 0.000 0.000 chr7 115930152 116035763
view TFF1 236 88 21 16 0 0 0.915 0.341 0.081 0.062 0.000 0.000 chr21 42357282 42371535
view TFF2 226 81 31 23 0 0 0.876 0.314 0.120 0.089 0.000 0.000 chr21 42341357 42355994
view TFF3 225 76 28 26 3 1 0.872 0.295 0.109 0.101 0.012 0.004 chr21 42306667 42320409
view TFG 174 59 71 41 0 0 0.674 0.229 0.275 0.159 0.000 0.000 chr3 100704494 100753964
view TFIP11 209 84 45 19 0 0 0.810 0.326 0.174 0.074 0.000 0.000 chr22 26486240 26517473
view TFPI2 214 84 41 19 0 0 0.829 0.326 0.159 0.074 0.000 0.000 chr7 93880396 93895753
view TFPI 171 55 57 32 0 0 0.663 0.213 0.221 0.124 0.000 0.000 chr2 187459230 187559435
view TFPT 214 74 38 26 2 1 0.829 0.287 0.147 0.101 0.008 0.004 chr19 54102020 54120657
view TFR2 167 48 81 47 0 0 0.647 0.186 0.314 0.182 0.000 0.000 chr7 100615420 100646552
view TFRC 191 59 58 39 0 0 0.740 0.229 0.225 0.151 0.000 0.000 chr3 196044284 196087090
view TF 200 65 44 29 0 0 0.775 0.252 0.171 0.112 0.000 0.000 chr3 133741393 133801641
view TGDS 186 58 64 40 0 0 0.721 0.225 0.248 0.155 0.000 0.000 chr13 94569054 94601152
view TGFA 171 52 56 37 0 0 0.663 0.202 0.217 0.143 0.000 0.000 chr2 70442284 70558826
view TGFB1I1 204 67 50 34 0 0 0.791 0.260 0.194 0.132 0.000 0.000 chr16 31467152 31482958
view TGFB1 185 47 60 47 0 0 0.717 0.182 0.233 0.182 0.000 0.000 chr19 41325323 41358922
view TGFB2 144 48 81 39 0 0 0.558 0.186 0.314 0.151 0.000 0.000 chr1 218340336 218449619
view TGFB3 188 64 60 35 0 0 0.729 0.248 0.233 0.136 0.000 0.000 chr14 75953097 75986995
view TGFBI 201 76 46 21 0 0 0.779 0.295 0.178 0.081 0.000 0.000 chr5 136023988 136068818
view TGFBR1 180 69 69 30 0 0 0.698 0.267 0.267 0.116 0.000 0.000 chr9 99100113 99159192
view TGFBR2 194 60 42 30 0 0 0.752 0.233 0.163 0.116 0.000 0.000 chr3 30601601 30699142
view TGFBR3L 222 72 31 28 0 0 0.860 0.279 0.120 0.109 0.000 0.000 chr19 7909830 7924097
view TGFBR3 141 35 58 37 0 0 0.547 0.136 0.225 0.143 0.000 0.000 chr1 91675343 91891151
view TGFBRAP1 189 65 64 37 0 0 0.733 0.252 0.248 0.143 0.000 0.000 chr2 105259414 105334735
view TGIF1 223 79 30 21 1 1 0.864 0.306 0.116 0.081 0.004 0.004 chr18 3445172 3464978
view TGIF2LX 99 31 153 70 0 0 0.384 0.120 0.593 0.271 0.000 0.000 chrX 89916908 89927883
view TGIF2LY 0 0 130 57 0 0 0.000 0.000 0.504 0.221 0.000 0.000 chrY 3574067 3585041
view TGIF2 180 56 64 40 0 0 0.698 0.217 0.248 0.155 0.000 0.000 chr20 36568597 36598950
view TGM1 209 73 46 29 0 0 0.810 0.283 0.178 0.112 0.000 0.000 chr14 24244114 24268177
view TGM2 179 58 59 35 0 0 0.694 0.225 0.229 0.136 0.000 0.000 chr20 38122385 38170270
view TGM3 179 51 56 34 0 0 0.694 0.198 0.217 0.132 0.000 0.000 chr20 2291001 2346079
view TGM4 156 32 81 59 0 0 0.605 0.124 0.314 0.229 0.000 0.000 chr3 44869608 44919990
view TGM5 166 56 80 39 0 0 0.643 0.217 0.310 0.151 0.000 0.000 chr15 43227590 43271928
view TGM6 209 73 34 19 0 0 0.810 0.283 0.132 0.074 0.000 0.000 chr20 2375901 2437753
view TGM7 171 63 78 35 0 0 0.663 0.244 0.302 0.136 0.000 0.000 chr15 43271271 43307255