Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG02897	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0002	GWD	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG02897	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0021	GWD	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG02897	hp1	a0001	a0001c0009	a0001c0009t0004	a0001c0009t0004g0255	GWD	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG02897	hp2	a0001	a0001c0008	a0001c0008t0001	a0001c0008t0001g0039	GWD	AFR	A1CF	chr10	50794409	50890627
A3GALT2_chr1_33301766_33326098	HG02897	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0098	GWD	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG02897	hp2	a0005	a0005c0005	a0005c0005t0000	a0005c0005t0000g0028	GWD	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG02897	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0386	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG02897	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0248	GWD	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG02897	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0021	GWD	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0038	GWD	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG02897	hp1	a0001	a0001c0005	a0001c0005t0001	a0001c0005t0001g0177	GWD	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0039	GWD	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG02897	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0104	GWD	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG02897	hp2	a0001	a0001c0009	a0001c0009t0001	a0001c0009t0001g0348	GWD	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG02897	hp1	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0002	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG02897	hp2	a0001	a0001c0001	a0001c0001t0011	a0001c0001t0011g0038	GWD	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG02897	hp1	a0003	a0003c0005	a0003c0005t0007	a0003c0005t0007g0003	GWD	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG02897	hp2	a0007	a0007c0011	a0007c0011t0020	a0007c0011t0020g0106	GWD	AFR	AADACL3	chr1	12711110	12733760
AADAC_chr3_151809116_151833488	HG02897	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0001	GWD	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG02897	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0015	GWD	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG02897	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0176	GWD	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0046	GWD	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG02897	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0237	GWD	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG02897	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	GWD	AFR	AAGAB	chr15	67195667	67259661
AAMDC_chr11_77816144_77877352	HG02897	hp1	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0010	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG02897	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0277	GWD	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG02897	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0007	GWD	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG02897	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	GWD	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG02897	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0157	GWD	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG02897	hp2	a0001	a0001c0002	a0001c0002t0004	a0001c0002t0004g0028	GWD	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG02897	hp1	a0001	a0001c0001	a0001c0001t0009	a0001c0001t0009g0003	GWD	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	GWD	AFR	AARD	chr8	116933207	116949487
AASDHPPT_chr11_106072662_106103695	HG02897	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0034	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG02897	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0026	GWD	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG02897	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0046	GWD	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG02897	hp2	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0240	GWD	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG02897	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0255	GWD	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG02897	hp2	a0004	a0004c0005	a0004c0005t0008	a0004c0005t0008g0011	GWD	AFR	AASS	chr7	122068549	122149249
AATK_chr17_81112295_81171221	HG02897	hp1	a0003	a0003c0007	a0003c0007t0001	a0003c0007t0001g0319	GWD	AFR	AATK	chr17	81112295	81171221
AATK_chr17_81112295_81171221	HG02897	hp2	a0006	a0006c0013	a0006c0013t0001	a0006c0013t0001g0013	GWD	AFR	AATK	chr17	81112295	81171221
ABAT_chr16_8669617_8789570	HG02897	hp1	a0002	a0002c0008	a0002c0008t0002	a0002c0008t0002g0014	GWD	AFR	ABAT	chr16	8669617	8789570
ABAT_chr16_8669617_8789570	HG02897	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0303	GWD	AFR	ABAT	chr16	8669617	8789570
ABCA12_chr2_214926542_215143626	HG02897	hp1	a0001	a0001c0005	a0001c0005t0005	a0001c0005t0005g0110	GWD	AFR	ABCA12	chr2	214926542	215143626
ABCA12_chr2_214926542_215143626	HG02897	hp2	a0002	a0002c0017	a0002c0017t0016	a0002c0017t0016g0180	GWD	AFR	ABCA12	chr2	214926542	215143626
ABCA13_chr7_48166458_48652497	HG02897	hp1	a0024	a0024c0027	a0024c0027t0001	a0024c0027t0001g0161	GWD	AFR	ABCA13	chr7	48166458	48652497
ABCA13_chr7_48166458_48652497	HG02897	hp2	a0040	a0040c0111	a0040c0111t0006	a0040c0111t0006g0031	GWD	AFR	ABCA13	chr7	48166458	48652497
ABCA1_chr9_104776006_104933155	HG02897	hp1	a0002	a0002c0024	a0002c0024t0008	a0002c0024t0008g0003	GWD	AFR	ABCA1	chr9	104776006	104933155
ABCA1_chr9_104776006_104933155	HG02897	hp2	a0002	a0002c0015	a0002c0015t0013	a0002c0015t0013g0306	GWD	AFR	ABCA1	chr9	104776006	104933155