Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03471	hp1	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0039	MSL	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03471	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	MSL	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03471	hp1	a0001	a0001c0001	a0001c0001t0040	a0001c0001t0040g0047	MSL	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03471	hp2	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0243	MSL	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03471	hp1	a0013	a0013c0021	a0013c0021t0002	a0013c0021t0002g0196	MSL	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03471	hp2	a0036	a0036c0055	a0036c0055t0004	a0036c0055t0004g0033	MSL	AFR	A2ML1	chr12	8817621	8881787
A2M_chr12_9062708_9120919	HG03471	hp1	a0001	a0001c0005	a0001c0005t0002	a0001c0005t0002g0135	MSL	AFR	A2M	chr12	9062708	9120919
A2M_chr12_9062708_9120919	HG03471	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0089	MSL	AFR	A2M	chr12	9062708	9120919
A3GALT2_chr1_33301766_33326098	HG03471	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0259	MSL	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03471	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0178	MSL	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03471	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0289	MSL	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03471	hp2	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0246	MSL	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03471	hp1	a0001	a0001c0003	a0001c0003t0003	a0001c0003t0003g0020	MSL	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0187	MSL	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03471	hp1	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0156	MSL	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0015	MSL	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03471	hp1	a0002	a0002c0007	a0002c0007t0001	a0002c0007t0001g0017	MSL	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0010	MSL	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03471	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0016	MSL	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03471	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0012	MSL	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03471	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0022	MSL	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03471	hp2	a0007	a0007c0011	a0007c0011t0016	a0007c0011t0016g0025	MSL	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03471	hp1	a0001	a0001c0001	a0001c0001t0005	a0001c0001t0005g0121	MSL	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03471	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0058	MSL	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03471	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0012	MSL	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03471	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0011	MSL	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03471	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	MSL	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0196	MSL	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03471	hp1	a0003	a0003c0005	a0003c0005t0004	a0003c0005t0004g0357	MSL	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03471	hp2	a0001	a0001c0001	a0001c0001t0015	a0001c0001t0015g0253	MSL	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG03471	hp1	a0001	a0001c0001	a0001c0001t0117	a0001c0001t0117g0189	MSL	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03471	hp2	a0004	a0004c0012	a0004c0012t0036	a0004c0012t0036g0283	MSL	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG03471	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0072	MSL	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03471	hp2	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0006	MSL	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03471	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0005	MSL	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	MSL	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03471	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AANAT	chr17	76462603	76475117
AAR2_chr20_36231478_36261933	HG03471	hp1	a0001	a0001c0002	a0001c0002t0002	a0001c0002t0002g0190	MSL	AFR	AAR2	chr20	36231478	36261933
AAR2_chr20_36231478_36261933	HG03471	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0123	MSL	AFR	AAR2	chr20	36231478	36261933
AARD_chr8_116933207_116949487	HG03471	hp1	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0013	MSL	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03471	hp2	a0002	a0002c0002	a0002c0002t0001	a0002c0002t0001g0003	MSL	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03471	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0037	MSL	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03471	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0350	MSL	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03471	hp1	a0003	a0003c0005	a0003c0005t0006	a0003c0005t0006g0013	MSL	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03471	hp2	a0004	a0004c0004	a0004c0004t0001	a0004c0004t0001g0012	MSL	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03471	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0006	MSL	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03471	hp2	a0001	a0001c0002	a0001c0002t0001	a0001c0002t0001g0022	MSL	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03471	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0003	MSL	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03471	hp2	a0001	a0001c0001	a0001c0001t0007	a0001c0001t0007g0017	MSL	AFR	AASDHPPT	chr11	106072662	106103695