Joint Open Genome and Omics Platform (JoGo)

Search Genic Haplotype Status by Sample

Sampleid

* Sampleid must be selected for search to work. Choose specific sample identifier (e.g., HG00096, NA18525).

Regionname

e.g. ALDH2_chr12_111761933_111822532, HBB_chr11_5220464_5232071.

Genename

e.g. ALDH2, HBB.

Gpopname

Filter by gpopulation group.

Popname

Filter by population group.

Chr

Chromosome name (e.g., chr11).

Start

Start genomic position (GRCh38).

End

End genomic position (GRCh38).

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⚠️ Results limited to 10,000 hits. Refine your search for more specific results.

regionname	sampleid	ID haplotypeid	ahapid	achapid	acthapid	actghapid	popname	gpopname	genename	chr	start	end
A1BG_chr19_58340183_58358492	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	A1BG	chr19	58340183	58358492
A1BG_chr19_58340183_58358492	HG03579	hp2	a0002	a0002c0002	a0002c0002t0002	a0002c0002t0002g0008	MSL	AFR	A1BG	chr19	58340183	58358492
A1CF_chr10_50794409_50890627	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0030	MSL	AFR	A1CF	chr10	50794409	50890627
A1CF_chr10_50794409_50890627	HG03579	hp2	a0002	a0002c0004	a0002c0004t0006	a0002c0004t0006g0032	MSL	AFR	A1CF	chr10	50794409	50890627
A2ML1_chr12_8817621_8881787	HG03579	hp1	a0006	a0006c0011	a0006c0011t0005	a0006c0011t0005g0220	MSL	AFR	A2ML1	chr12	8817621	8881787
A2ML1_chr12_8817621_8881787	HG03579	hp2	a0021	a0021c0031	a0021c0031t0003	a0021c0031t0003g0199	MSL	AFR	A2ML1	chr12	8817621	8881787
A3GALT2_chr1_33301766_33326098	HG03579	hp1	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0019	MSL	AFR	A3GALT2	chr1	33301766	33326098
A3GALT2_chr1_33301766_33326098	HG03579	hp2	a0001	a0001c0001	a0001c0001t0000	a0001c0001t0000g0159	MSL	AFR	A3GALT2	chr1	33301766	33326098
A4GALT_chr22_42687121_42725870	HG03579	hp1	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0241	MSL	AFR	A4GALT	chr22	42687121	42725870
A4GALT_chr22_42687121_42725870	HG03579	hp2	a0001	a0001c0002	a0001c0002t0021	a0001c0002t0021g0282	MSL	AFR	A4GALT	chr22	42687121	42725870
A4GNT_chr3_138118713_138137390	HG03579	hp1	a0001	a0001c0001	a0001c0001t0004	a0001c0001t0004g0032	MSL	AFR	A4GNT	chr3	138118713	138137390
A4GNT_chr3_138118713_138137390	HG03579	hp2	a0002	a0002c0002	a0002c0002t0006	a0002c0002t0006g0072	MSL	AFR	A4GNT	chr3	138118713	138137390
AAAS_chr12_53302460_53326610	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AAAS	chr12	53302460	53326610
AAAS_chr12_53302460_53326610	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	MSL	AFR	AAAS	chr12	53302460	53326610
AACS_chr12_125060435_125148316	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0162	MSL	AFR	AACS	chr12	125060435	125148316
AACS_chr12_125060435_125148316	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	MSL	AFR	AACS	chr12	125060435	125148316
AADACL2_chr3_151728927_151766339	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AADACL2	chr3	151728927	151766339
AADACL2_chr3_151728927_151766339	HG03579	hp2	a0001	a0001c0001	a0001c0001t0047	a0001c0001t0047g0126	MSL	AFR	AADACL2	chr3	151728927	151766339
AADACL3_chr1_12711110_12733760	HG03579	hp1	a0013	a0013c0026	a0013c0026t0012	a0013c0026t0012g0089	MSL	AFR	AADACL3	chr1	12711110	12733760
AADACL3_chr1_12711110_12733760	HG03579	hp2	a0009	a0009c0013	a0009c0013t0010	a0009c0013t0010g0002	MSL	AFR	AADACL3	chr1	12711110	12733760
AADACL4_chr1_12639085_12672076	HG03579	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0256	MSL	AFR	AADACL4	chr1	12639085	12672076
AADACL4_chr1_12639085_12672076	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0259	MSL	AFR	AADACL4	chr1	12639085	12672076
AADAC_chr3_151809116_151833488	HG03579	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0015	MSL	AFR	AADAC	chr3	151809116	151833488
AADAC_chr3_151809116_151833488	HG03579	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0084	MSL	AFR	AADAC	chr3	151809116	151833488
AADAT_chr4_170055222_170094956	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0088	MSL	AFR	AADAT	chr4	170055222	170094956
AADAT_chr4_170055222_170094956	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0007	MSL	AFR	AADAT	chr4	170055222	170094956
AAGAB_chr15_67195667_67259661	HG03579	hp1	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0236	MSL	AFR	AAGAB	chr15	67195667	67259661
AAGAB_chr15_67195667_67259661	HG03579	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0053	MSL	AFR	AAGAB	chr15	67195667	67259661
AAK1_chr2_69452997_69648739	HG03579	hp1	a0002	a0002c0005	a0002c0005t0122	a0002c0005t0122g0182	MSL	AFR	AAK1	chr2	69452997	69648739
AAK1_chr2_69452997_69648739	HG03579	hp2	a0002	a0002c0016	a0002c0016t0103	a0002c0016t0103g0106	MSL	AFR	AAK1	chr2	69452997	69648739
AAMDC_chr11_77816144_77877352	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0179	MSL	AFR	AAMDC	chr11	77816144	77877352
AAMDC_chr11_77816144_77877352	HG03579	hp2	a0002	a0002c0003	a0002c0003t0001	a0002c0003t0001g0073	MSL	AFR	AAMDC	chr11	77816144	77877352
AAMP_chr2_218259129_218275137	HG03579	hp1	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0014	MSL	AFR	AAMP	chr2	218259129	218275137
AAMP_chr2_218259129_218275137	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0023	MSL	AFR	AAMP	chr2	218259129	218275137
AANAT_chr17_76462603_76475117	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0001	MSL	AFR	AANAT	chr17	76462603	76475117
AANAT_chr17_76462603_76475117	HG03579	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0005	MSL	AFR	AANAT	chr17	76462603	76475117
AARD_chr8_116933207_116949487	HG03579	hp1	a0002	a0002c0002	a0002c0002t0010	a0002c0002t0010g0016	MSL	AFR	AARD	chr8	116933207	116949487
AARD_chr8_116933207_116949487	HG03579	hp2	a0001	a0001c0001	a0001c0001t0006	a0001c0001t0006g0016	MSL	AFR	AARD	chr8	116933207	116949487
AARS1_chr16_70247298_70294506	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0059	MSL	AFR	AARS1	chr16	70247298	70294506
AARS1_chr16_70247298_70294506	HG03579	hp2	a0002	a0002c0004	a0002c0004t0001	a0002c0004t0001g0354	MSL	AFR	AARS1	chr16	70247298	70294506
AARS2_chr6_44293731_44318347	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0022	MSL	AFR	AARS2	chr6	44293731	44318347
AARS2_chr6_44293731_44318347	HG03579	hp2	a0001	a0001c0002	a0001c0002t0007	a0001c0002t0007g0014	MSL	AFR	AARS2	chr6	44293731	44318347
AARSD1_chr17_42945526_42969454	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0003	MSL	AFR	AARSD1	chr17	42945526	42969454
AARSD1_chr17_42945526_42969454	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0020	MSL	AFR	AARSD1	chr17	42945526	42969454
AASDHPPT_chr11_106072662_106103695	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0102	MSL	AFR	AASDHPPT	chr11	106072662	106103695
AASDHPPT_chr11_106072662_106103695	HG03579	hp2	a0001	a0001c0001	a0001c0001t0002	a0001c0001t0002g0045	MSL	AFR	AASDHPPT	chr11	106072662	106103695
AASDH_chr4_56333290_56392491	HG03579	hp1	a0003	a0003c0003	a0003c0003t0002	a0003c0003t0002g0048	MSL	AFR	AASDH	chr4	56333290	56392491
AASDH_chr4_56333290_56392491	HG03579	hp2	a0018	a0018c0023	a0018c0023t0002	a0018c0023t0002g0043	MSL	AFR	AASDH	chr4	56333290	56392491
AASS_chr7_122068549_122149249	HG03579	hp1	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0315	MSL	AFR	AASS	chr7	122068549	122149249
AASS_chr7_122068549_122149249	HG03579	hp2	a0001	a0001c0001	a0001c0001t0001	a0001c0001t0001g0004	MSL	AFR	AASS	chr7	122068549	122149249